Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2136 and GFF2137 overlap by 4 nucleotidesGFF2137 and GFF2138 are separated by 36 nucleotidesGFF2138 and GFF2139 overlap by 4 nucleotidesGFF2139 and GFF2140 are separated by 52 nucleotides GFF2136 - Ribokinase (EC 2.7.1.15), at 184,624 to 185,589 GFF2136 GFF2137 - Ribose operon repressor, at 185,586 to 186,683 GFF2137 GFF2138 - Ribose ABC transporter, permease protein RbsC (TC 3.A.1.2.1), at 186,720 to 187,709 GFF2138 GFF2139 - Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1), at 187,706 to 189,334 GFF2139 GFF2140 - Ribose ABC transporter, substrate-binding protein RbsB (TC 3.A.1.2.1), at 189,387 to 190,340 GFF2140
Group Condition GFF2136 GFF2137 GFF2138 GFF2139 GFF2140
complex community Community=arabino-guar; Passage=4 -2.2 -2.3 -1.4 -2.8 +0.1
complex community Community=guar; Passage=4 -3.7 -2.2 -1.1 -0.4 -0.2
complex community Community=arabino-guar; Passage=4 -1.4 -1.6 +0.0 -3.4 +0.1
complex community Community=guar; Passage=4 -1.1 -2.0 -0.3 -1.3 -0.4
complex community Community=guar; Passage=4 -2.8 -2.1 -0.4 +1.0 -0.3
complex community Community=Locust bean gum; Passage=4 -0.9 -2.0 -0.7 +0.9 -0.7
complex community Community=arabino-guar; Passage=4 -0.7 -2.7 -0.5 +1.2 -0.4
complex community Community=arabino-guar; Passage=4 -1.2 -1.9 +0.4 -0.5 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.1 -0.5 -2.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.8 -0.2 -0.4 -0.8 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.3 -0.5 -1.3 -0.3
complex community Community=Kojac gum; Passage=4 -1.7 -2.0 +1.3 +0.6 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.3 -0.2 -0.9 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.4 -0.6 +0.0 -0.8
complex community Community=Locust bean gum; Passage=4 -1.1 -0.7 -0.2 +0.6 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 +0.1 +0.1 -1.4 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.4 -0.7 -0.4 +0.2 -0.2
no phage control no phage control -0.2 -0.3 +0.2 -0.8 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 -0.6 -0.1 +0.3 -0.5
complex community Community=Locust bean gum; Passage=4 +0.2 -0.3 -0.2 -1.0 -0.1
complex community Community=guar; Passage=4 -0.4 -1.6 +0.7 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.7 -0.5 -0.3 +0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.5 +0.2 -0.6 -0.2
complex community Community=Locust bean gum; Passage=4 -0.9 -0.8 +0.6 +0.7 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.7 -0.2 +0.6 -0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.5 +0.5 -0.6 +0.1
phage phage_bap4 +0.5 -0.3 -0.7 +0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.1 -0.5 +0.4 -0.5
phage phage_bap4 +0.3 -0.1 +0.3 -0.8 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.1 -0.3 +0.7 -0.2
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