Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2130 and GFF2131 overlap by 4 nucleotidesGFF2131 and GFF2132 overlap by 1 nucleotidesGFF2132 and GFF2133 are separated by 40 nucleotidesGFF2133 and GFF2134 are separated by 87 nucleotides GFF2130 - hypothetical protein, at 178,916 to 179,506 GFF2130 GFF2131 - Putative protease, at 179,503 to 181,353 GFF2131 GFF2132 - Thiol:disulfide interchange protein DsbC, at 181,353 to 182,075 GFF2132 GFF2133 - 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase, at 182,116 to 183,243 GFF2133 GFF2134 - probable iron-sulfur binding protein YPO1417, at 183,331 to 184,212 GFF2134
Group Condition GFF2130 GFF2131 GFF2132 GFF2133 GFF2134
complex community Community=guar; Passage=4 -0.1 -0.3 +0.0 N.D. -1.5
complex community Community=Locust bean gum; Passage=4 -0.3 -0.4 +0.3 N.D. -1.3
complex community Community=guar; Passage=4 -0.3 -0.2 +0.3 N.D. -1.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.0 +0.0 N.D. -1.3
complex community Community=Locust bean gum; Passage=4 -0.4 -0.3 -0.2 N.D. -0.3
complex community Community=arabino-guar; Passage=4 -0.1 -0.2 +0.2 N.D. -1.1
complex community Community=guar; Passage=4 -0.4 -0.3 -0.6 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.0 -0.1 N.D. -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.1 +0.1 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 -0.0 -0.1 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 +0.0 +0.0 N.D. +0.5
no phage control no phage control -0.3 -0.0 +0.0 N.D. +0.4
complex community Community=Kojac gum; Passage=1 +0.2 -0.0 +0.1 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.1 +0.0 N.D. -0.1
phage phage_bap4 -0.1 -0.0 -0.1 N.D. +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 +0.0 N.D. +0.6
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.0 -0.1 N.D. +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.1 +0.1 N.D. +0.6
phage phage_bap4 +0.1 +0.1 -0.1 N.D. +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.1 +0.0 N.D. +0.2
complex community Community=arabino-guar; Passage=4 +0.4 -0.3 -0.0 N.D. +0.6
phage phage_bap4 +0.0 +0.0 +0.1 N.D. +0.5
complex community Community=arabino-guar; Passage=4 +0.6 +0.0 +0.2 N.D. -0.2
complex community Community=guar; Passage=4 +0.6 -0.3 -0.1 N.D. +0.4
no phage control no phage control +0.2 +0.0 +0.1 N.D. +0.5
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.0 +0.0 N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.0 +0.1 N.D. +0.5
complex community Community=Locust bean gum; Passage=4 +0.0 -0.2 +0.1 N.D. +1.0
complex community Community=Kojac gum; Passage=4 -0.1 -0.0 +0.2 N.D. +1.1
complex community Community=Locust bean gum; Passage=4 +0.7 -0.2 +0.4 N.D. +0.4
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