Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2113 and GFF2114 are separated by 121 nucleotidesGFF2114 and GFF2115 are separated by 145 nucleotidesGFF2115 and GFF2116 are separated by 244 nucleotidesGFF2116 and GFF2117 are separated by 223 nucleotides GFF2113 - NADH dehydrogenase (EC 1.6.99.3), at 162,101 to 162,772 GFF2113 GFF2114 - 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type, at 162,894 to 164,534 GFF2114 GFF2115 - transcriptional regulator, AraC family, at 164,680 to 165,492 GFF2115 GFF2116 - Cytochrome P450, at 165,737 to 167,131 GFF2116 GFF2117 - KEGG: type IV fimbrial biogenesis protein FimT, at 167,355 to 167,906 GFF2117
Group Condition GFF2113 GFF2114 GFF2115 GFF2116 GFF2117
complex community Community=arabino-guar; Passage=4 -1.0 +0.4 N.D. -0.3 -1.7
complex community Community=guar; Passage=4 -0.9 -0.7 N.D. -0.4 -0.4
complex community Community=arabino-guar; Passage=4 -0.4 +0.5 N.D. -0.3 -0.6
complex community Community=Locust bean gum; Passage=4 +0.3 -0.6 N.D. -0.1 -0.3
complex community Community=arabino-guar; Passage=4 +0.2 +0.8 N.D. -0.6 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.4 N.D. +0.1 -0.3
complex community Community=guar; Passage=4 -0.3 +0.3 N.D. -0.2 -0.1
complex community Community=guar; Passage=4 -0.1 +0.8 N.D. -0.2 -0.8
complex community Community=Locust bean gum; Passage=4 -0.1 +0.3 N.D. -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.4 N.D. -0.1 +0.4
complex community Community=Locust bean gum; Passage=1 +0.2 +0.4 N.D. -0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.3 N.D. -0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 +0.2 N.D. -0.3 +0.2
complex community Community=guar; Passage=4 -0.3 +0.3 N.D. -0.0 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 N.D. +0.0 +0.5
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.1 N.D. -0.0 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.3 N.D. +0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.2 N.D. +0.0 +0.4
phage phage_bap4 -0.2 +0.4 N.D. -0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.1 N.D. +0.0 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.1 N.D. +0.0 +0.4
phage phage_bap4 +0.1 +0.0 N.D. +0.1 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.3 N.D. +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.0 N.D. -0.0 +0.6
phage phage_bap4 +0.2 +0.3 N.D. +0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.0 N.D. +0.1 +0.5
vitamin M9 with Supernatant from Cyptococcus +0.4 +0.1 N.D. -0.0 +0.5
complex community Community=Locust bean gum; Passage=4 +0.4 +0.4 N.D. -0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.1 N.D. +0.1 +0.5
complex community Community=Kojac gum; Passage=4 +0.5 +0.6 N.D. -0.2 +0.3
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