Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF2107 and GFF2108 overlap by 4 nucleotidesGFF2108 and GFF2109 are separated by 19 nucleotidesGFF2109 and GFF2110 are separated by 56 nucleotidesGFF2110 and GFF2111 are separated by 55 nucleotides GFF2107 - no description, at 157,759 to 158,112 GFF2107 GFF2108 - hypothetical protein, at 158,109 to 159,125 GFF2108 GFF2109 - FIG00454067: hypothetical protein, at 159,145 to 159,390 GFF2109 GFF2110 - no description, at 159,447 to 160,289 GFF2110 GFF2111 - Permease of the drug/metabolite transporter (DMT) superfamily, at 160,345 to 161,250 GFF2111
Group Condition GFF2107 GFF2108 GFF2109 GFF2110 GFF2111
complex community Community=arabino-guar; Passage=4 -1.7 -2.1 +0.3 -0.4 -3.8
complex community Community=Locust bean gum; Passage=4 -4.8 -0.6 +0.5 +0.5 -0.8
complex community Community=guar; Passage=4 -1.8 +0.2 -1.1 -0.4 -2.0
complex community Community=arabino-guar; Passage=4 -1.0 -0.0 -1.8 +0.0 -2.2
complex community Community=Locust bean gum; Passage=4 -0.7 -0.3 -1.1 -0.1 -1.4
complex community Community=arabino-guar; Passage=4 -0.3 -1.1 -0.3 +0.2 -1.4
complex community Community=Kojac gum; Passage=4 -0.5 -0.7 -0.1 +0.2 -1.7
complex community Community=guar; Passage=4 -0.1 -0.5 +0.4 -0.5 -1.7
complex community Community=guar; Passage=4 -0.6 -0.4 -0.6 +0.3 -0.8
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.3 -0.5 -0.2 -1.0
complex community Community=arabino-guar; Passage=4 +0.3 -0.3 -1.8 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.9 -0.0 -0.7 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.6 -0.0 -0.6
complex community Community=Kojac gum; Passage=1 +0.1 -0.3 -0.7 +0.0 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.5 -0.6 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -1.4 +0.2 +0.1 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.6 +0.1 -0.2 +0.2 -0.5
no phage control no phage control +0.1 -0.2 -1.1 +0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.5 -0.1 -0.3 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 +0.3 +0.2 -0.2 -0.4
complex community Community=Locust bean gum; Passage=1 +0.5 +0.0 -0.7 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.3 +0.1 -0.0 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.5 +0.5 -0.2 -0.6
complex community Community=Locust bean gum; Passage=4 -0.7 -0.7 +0.6 +0.2 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.2 +0.7 +0.1 -0.8
phage phage_bap4 +0.3 +0.5 -0.8 -0.2 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.7 +0.2 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.4 +0.6 +0.2 -0.5
phage phage_bap4 +0.3 +0.2 -0.4 +0.3 +0.7
complex community Community=Locust bean gum; Passage=4 -0.0 +0.2 +1.0 -0.2 +0.2
remove
GFF2107
plot
remove
GFF2108
plot
remove
GFF2109
remove
GFF2110
plot
remove
GFF2111
plot