Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_10725	PS417_10730	PS417_10735	PS417_10740	PS417_10745
stress	Cisplatin 0.01 mg/ml	-5.2	+0.0	-0.2	-0.2	+0.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	-1.1	-0.2	-0.1	-0.8	-0.0
stress	Paraquat dichloride 0.008 mg/ml	-0.8	-0.2	-0.3	-0.4	-0.2
soil	soil sample 6; outgrowth in LB	-1.1	-0.0	-0.4	-0.4	-0.0
carbon source	L-Valine (C)	-1.7	-0.1	+0.1	-0.2	+0.0
phage	JP1 MOI 10	+0.1	-0.4	-0.3	-0.8	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5	-0.0	-0.3	-0.5	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.0	+0.1	-0.7	-0.4
phage	Wcs_1	-1.0	+0.1	-0.1	-0.3	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	+0.3	-0.0	-1.0	-0.1
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	-0.2	+0.2	-0.7	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-0.2	-0.2	-0.5	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.9	-0.1	-0.1	+0.3	-0.3
phage	P. simiae OR1 MOI 0.1	-1.3	+0.0	-0.1	+0.4	-0.1
supernatant control	Vogels_fungal_media 0.1X	+0.3	+0.1	+0.1	-0.6	-0.4
stress	Doxycycline hyclate 0.001 mg/ml	+0.1	+0.0	+0.5	-0.8	-0.3
stress	methylglyoxal 0.032 vol%	-0.8	+0.2	+0.5	+0.1	-0.3
stress	Gentamicin 0.008 mg/ml	+0.5	-0.3	-0.2	+0.4	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	-0.0	-0.2	-0.4	+0.7
carbon source	L-Valine (C)	+0.3	-0.5	-0.3	+0.2	+0.4
phage	P. simiae Grant Run MOI 10	-0.0	+0.2	-0.3	+0.7	-0.3
liquid stress	80% Methanol 3 mM; liquid stress	+0.5	+0.2	+0.2	-0.6	+0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.5	+0.7	-0.2	+0.4	-0.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.5	+0.0	+0.7	+0.4	-0.0
stress	1-ethyl-3-methylimidazolium chloride 200 mM	-0.5	+0.3	+0.6	+0.2	+0.0
phage	P. simiae ORA MOI 1	+0.2	-0.0	-0.2	+0.9	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.5	+0.2	-0.1	+0.8	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	-0.1	+0.3	+0.7	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.7	-0.1	-0.1	+0.8	+0.5
stress	LB_noSalt with Chloride 1100 mM	-0.0	+0.4	+0.4	+0.6	+0.6