Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2100 and GFF2101 are separated by 100 nucleotidesGFF2101 and GFF2102 are separated by 158 nucleotidesGFF2102 and GFF2103 are separated by 206 nucleotidesGFF2103 and GFF2104 are separated by 138 nucleotides GFF2100 - no description, at 149,221 to 149,598 GFF2100 GFF2101 - no description, at 149,699 to 150,430 GFF2101 GFF2102 - no description, at 150,589 to 151,461 GFF2102 GFF2103 - Regulatory protein, LuxR:Tetratricopeptide TPR_4, at 151,668 to 154,355 GFF2103 GFF2104 - 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35), at 154,494 to 155,276 GFF2104
Group Condition GFF2100 GFF2101 GFF2102 GFF2103 GFF2104
complex community Community=Locust bean gum; Passage=4 -3.4 -0.5 +0.4 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 -0.6 -0.3 -0.2 +0.4 -1.6
complex community Community=Kojac gum; Passage=4 -0.8 -2.2 +0.6 +0.3 +0.1
complex community Community=Locust bean gum; Passage=4 -1.8 -0.4 +0.3 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 -0.3 -0.0 -0.0 -0.9
phage phage_bap4 -1.0 +0.0 +0.2 -0.0 -0.9
no phage control no phage control -0.3 +0.1 +0.0 -0.2 -1.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.2 -0.0 +0.1 -0.8
complex community Community=guar; Passage=4 -0.2 +0.2 -0.3 +0.2 -1.0
phage phage_bap4 -0.4 +0.4 +0.1 -0.1 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.3 -0.1 +0.0 -0.6
complex community Community=arabino-guar; Passage=4 -1.4 -0.0 -0.5 +0.2 +0.7
phage phage_bap4 -0.4 +0.1 +0.1 +0.1 -0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.1 -0.1 +0.2 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.7 -0.2 -0.6 +0.1 +0.1
complex community Community=guar; Passage=4 -0.9 +0.3 +0.8 +0.1 -0.1
complex community Community=guar; Passage=4 +0.1 -0.3 +0.8 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.5 -0.2 +0.2 +0.0 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.4 +0.1 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 -0.3 -0.2 +0.0 +0.4
vitamin M9 with Supernatant from Cyptococcus -0.6 +0.1 +0.0 +0.0 +1.0
complex community Community=Locust bean gum; Passage=4 -0.9 +0.0 +0.9 +0.4 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.7 -0.5 +0.1 +0.1 +0.4
phage phage_bap4 +0.7 +0.4 +0.0 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.7 -0.4 -0.0 +0.1 +0.6
vitamin M9 with Supernatant from Cyptococcus +0.7 +0.1 -0.0 +0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.1 +0.1 +0.1 +0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 +0.1 -0.0 +0.2 +0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.7 -0.1 +0.1 +0.2 +0.6
complex community Community=Locust bean gum; Passage=4 +0.7 -0.3 +0.3 +0.3 +0.7
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