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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2100 and GFF2101 are separated by 149 nucleotides
GFF2101 and GFF2102 are separated by 801 nucleotides
GFF2102 and GFF2103 are separated by 216 nucleotides
GFF2103 and GFF2104 overlap by 4 nucleotides
GFF2100 - hypothetical protein, at 2,135,784 to 2,137,145
GFF2100
GFF2101 - FIG00636438: hypothetical protein, at 2,137,295 to 2,138,470
GFF2101
GFF2102 - hypothetical protein, at 2,139,272 to 2,139,541
GFF2102
GFF2103 - Ribonuclease J (endonuclease and 5, at 2,139,758 to 2,141,395
GFF2103
GFF2104 - Pantothenate kinase type III, CoaX-like (EC 2.7.1.33), at 2,141,392 to 2,142,174
GFF2104
Group
Condition
GFF2100
GFF2101
GFF2102
GFF2103
GFF2104
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.2
-0.5
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.1
-0.3
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
-0.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.0
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
+0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.0
-0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.2
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.0
+0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.2
+0.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
+0.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.0
+0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
+0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
+0.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
+0.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.0
+0.5
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
+0.4
N.D.
N.D.
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