Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_10660	PS417_10665	PS417_10670	PS417_10675	PS417_10680
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	-1.0	+0.2	-2.2	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.1	-0.4	-0.4	-1.6	-0.8
phage	P. simiae OR1 MOI 0.1	-0.0	-0.4	+0.4	-1.6	-1.4
nophagecontrol	Only library	+0.1	-0.5	+0.1	-1.8	-0.6
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.0	-0.5	-0.3	-1.9	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	-0.4	-0.3	-2.1	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-1.0	+0.1	-0.7	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.1	+0.2	-0.1	-1.5	-0.8
carbon source	Carbon source D-Mannitol 2.5 mM	+0.2	-0.6	-0.4	-1.4	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.2	-1.3	-0.2	+0.3	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	-0.6	+0.4	-1.1	-0.6
root	root sample 6; outgrowth in LB	-0.0	-0.7	-0.2	-1.8	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.1	+0.4	-1.9	-0.2
carbon source	L-Valine (C)	+0.1	-0.3	+0.6	-1.5	-0.6
phage	JP1 MOI 0.1	+0.1	-0.7	+0.5	-1.5	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.9	+0.6	-1.0	+0.1
stress	Gentamicin 0.008 mg/ml	-0.1	+0.5	-0.6	-1.3	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	+0.2	+1.2	-0.9	-1.3
phage	Wcs_1	+0.0	+0.9	-0.3	-0.9	-0.4
agar plate interaction control	Taped volatile agar plate with no fungus	+0.2	-1.7	+0.2	+0.5	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	-0.8	+0.4	+1.2	-0.4
phage	P. simiae ORA MOI 0.1	-0.0	+0.8	-0.4	+1.1	-0.7
phage	P. simiae OR Antrim MOI 1	+0.1	+0.7	-0.3	+1.4	-0.6
stress	Doxycycline hyclate 0.001 mg/ml	+0.1	+0.7	+0.4	-1.3	+1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2	+2.0	-0.1	+0.5	-0.9
carbon source	2'-Deoxyinosine 5 mM (C)	-0.0	+0.0	+0.2	+2.0	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.0	-0.4	-0.5	+3.1	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	-0.4	-0.3	+1.3	+1.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.1	+0.0	-0.3	+1.9	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	+0.2	+0.3	+1.2	+0.9