Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2075 and GFF2076 are separated by 24 nucleotidesGFF2076 and GFF2077 overlap by 4 nucleotidesGFF2077 and GFF2078 are separated by 3 nucleotidesGFF2078 and GFF2079 are separated by 48 nucleotides GFF2075 - BUG/TctC family periplasmic protein, at 121,166 to 122,161 GFF2075 GFF2076 - Alkyl sulfatase and related hydrolases, MBL-fold metallo-hydrolase superfamily, at 122,186 to 123,457 GFF2076 GFF2077 - Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative, at 123,454 to 124,794 GFF2077 GFF2078 - hypothetical protein, at 124,798 to 126,186 GFF2078 GFF2079 - BUG/TctC family periplasmic protein, at 126,235 to 127,227 GFF2079
Group Condition GFF2075 GFF2076 GFF2077 GFF2078 GFF2079
complex community Community=arabino-guar; Passage=4 -0.1 -0.3 -0.2 -0.2 -0.2
complex community Community=arabino-guar; Passage=4 +0.1 -0.6 -0.1 -0.2 -0.0
complex community Community=Locust bean gum; Passage=4 +0.1 +0.2 -0.2 -0.7 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.2 -0.1 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.1 +0.1 -0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.1 -0.2 -0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.3 +0.1 -0.2 -0.1
complex community Community=guar; Passage=4 +0.1 +0.0 -0.5 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.0 +0.1 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.0 +0.0 -0.2 +0.1
complex community Community=arabino-guar; Passage=4 -0.0 +0.5 +0.0 -0.2 -0.5
complex community Community=Kojac gum; Passage=1 -0.2 -0.2 -0.0 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.1 +0.0 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.3 +0.2 +0.1 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.2 +0.1 -0.1 +0.1
phage phage_bap4 +0.1 -0.2 +0.0 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 +0.0 -0.2 +0.2
complex community Community=arabino-guar; Passage=4 -0.2 +0.3 -0.4 +0.2 +0.1
complex community Community=guar; Passage=4 -0.5 +0.2 +0.2 +0.2 -0.1
complex community Community=guar; Passage=4 +0.2 +0.1 +0.0 -0.1 -0.2
no phage control no phage control +0.1 -0.2 +0.0 +0.2 -0.0
complex community Community=Locust bean gum; Passage=4 -0.3 +0.4 -0.0 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.2 +0.2 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.3 +0.1 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.3 +0.1 -0.1 +0.1
phage phage_bap4 -0.0 +0.2 -0.1 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 +0.1 +0.0 +0.2
complex community Community=guar; Passage=4 -0.0 +0.4 +0.1 +0.3 -0.4
complex community Community=Locust bean gum; Passage=4 +0.1 +0.5 -0.1 +0.3 -0.1
complex community Community=Kojac gum; Passage=4 +0.2 +0.3 -0.1 +0.8 +0.0
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