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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2064 and GFF2065 overlap by 1 nucleotides
GFF2065 and GFF2066 are separated by 148 nucleotides
GFF2066 and GFF2067 are separated by 61 nucleotides
GFF2067 and GFF2068 are separated by 20 nucleotides
GFF2064 - RidA/YER057c/UK114 superfamily protein, at 2,102,357 to 2,102,743
GFF2064
GFF2065 - D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-), at 2,102,743 to 2,103,900
GFF2065
GFF2066 - Transcriptional regulator, at 2,104,049 to 2,104,594
GFF2066
GFF2067 - hypothetical protein, at 2,104,656 to 2,105,678
GFF2067
GFF2068 - hypothetical protein, at 2,105,699 to 2,106,070
GFF2068
Group
Condition
GFF2064
GFF2065
GFF2066
GFF2067
GFF2068
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.4
-0.2
-0.1
-1.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
-0.2
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.1
-0.2
+0.1
-0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.2
-0.2
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
+0.1
+0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
-0.2
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
-0.0
+0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.1
+0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
-0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.0
+0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
-0.4
+0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
+0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
-0.1
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.0
+0.2
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
-0.0
+0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.2
+0.2
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.0
+0.2
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.9
+0.1
-0.1
+0.1
-0.1
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