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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2057 and GFF2058 are separated by 115 nucleotides
GFF2058 and GFF2059 are separated by 4 nucleotides
GFF2059 and GFF2060 are separated by 230 nucleotides
GFF2060 and GFF2061 are separated by 118 nucleotides
GFF2057 - Ketol-acid reductoisomerase (NADP(+)) (EC 1.1.1.86), at 2,094,215 to 2,095,234
GFF2057
GFF2058 - Protein yceI precursor, at 2,095,350 to 2,095,970
GFF2058
GFF2059 - YceI family protein, at 2,095,975 to 2,096,580
GFF2059
GFF2060 - 2-isopropylmalate synthase (EC 2.3.3.13), at 2,096,811 to 2,098,484
GFF2060
GFF2061 - Putative peptidase, at 2,098,603 to 2,099,985
GFF2061
Group
Condition
GFF2057
GFF2058
GFF2059
GFF2060
GFF2061
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-4.5
-0.2
-0.2
-4.3
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-4.6
+0.1
-0.3
-4.2
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-4.3
+0.2
-0.3
-4.3
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-4.7
+0.0
+0.0
-4.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-4.6
+0.1
+0.2
-4.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-3.9
-0.1
-0.1
-3.9
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-4.0
-0.1
-0.0
-3.9
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-3.8
+0.1
-0.1
-3.9
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-3.3
-0.6
-0.4
-3.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-3.6
+0.2
-0.4
-3.1
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-3.1
+0.0
-0.5
-3.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-3.5
+0.2
-0.1
-3.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-3.5
+0.3
-0.4
-3.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-3.5
+0.0
+0.0
-3.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-3.1
+0.0
+0.0
-3.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-3.3
+0.3
-0.2
-3.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-3.1
+0.2
-0.0
-2.6
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-3.1
+0.1
+0.1
-2.6
-0.0
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