Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_10485	PS417_10490	PS417_10495	PS417_10500	PS417_10505
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+0.0	-0.9	-0.1	-0.3	-0.3
carbon source	L-Valine (C)	-0.1	-0.6	-0.3	+0.0	-0.5
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.4	-0.2	-0.1	-0.2	-0.6
carbon source	L-Leucine (C)	-0.2	-0.8	-0.1	+0.1	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.4	-1.1	-0.3	+0.0	-0.2
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.1	-0.9	-0.4	+0.0	+0.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	-0.6	-0.1	+0.4	-0.6
carbon source	L-Valine (C)	-0.4	-0.7	+0.2	+0.2	-0.1
seeds	Growth on radish seeds for 72 hours	-0.4	-0.3	-0.4	-0.1	+0.3
agar plate interaction control	Taped volatile agar plate with no fungus	-0.5	+0.1	+0.3	-0.5	-0.2
phage	P. simiae Grant Run MOI 0.1	-0.1	-0.9	+0.0	-0.3	+0.5
no stress control on plate	growth on LB_noSalt plate	+0.2	-0.5	+0.2	+0.2	-0.7
phage	P. simiae Grant Run MOI 10	+0.6	+0.2	-0.6	-0.3	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	+0.1	+0.4	+0.3	-0.6
seeds	Growth on radish seeds for 72 hours	-0.3	+0.3	+0.1	+0.4	-0.7
solid stress	Fraxetin 3 mM; solid stress	+0.2	+0.7	+0.1	-0.1	-0.8
stress	Doxycycline hyclate 0.001 mg/ml	-0.6	+0.8	+0.1	+0.0	-0.2
phage	JP1 MOI 10	-0.6	+1.1	-0.5	-0.1	+0.3
phage	Wcs_0.1	-0.2	+0.8	-0.2	-0.1	+0.1
solid stress	Fraxetin 1 mM; solid stress	-0.1	+0.6	+0.5	-0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	+0.7	+0.4	+0.0	-0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3	+0.3	-0.3	-0.2	+0.5
soil	soil sample 6; outgrowth in LB	+0.7	+0.4	+0.1	+0.0	-0.5
phage	P. simiae OR1 MOI 0.1	-0.5	+1.2	-0.2	+0.1	+0.2
seeds	Growth on radish seeds for 72 hours	+0.3	+1.3	-0.1	-0.1	-0.3
phage	JP1 MOI 0.1	+0.3	+0.8	-0.4	-0.1	+0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.0	+1.3	-0.1	+0.0	+0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2	+0.8	-0.0	+0.1	+0.9
soil	soil sample 5; outgrowth in LB	+0.2	+0.9	+0.2	-0.0	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.1	+2.0	+0.2	+0.1	+0.0