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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2052 and GFF2053 are separated by 16 nucleotides
GFF2053 and GFF2054 are separated by 104 nucleotides
GFF2054 and GFF2055 overlap by 4 nucleotides
GFF2055 and GFF2056 overlap by 1 nucleotides
GFF2052 - Phosphoserine phosphatase (EC 3.1.3.3), at 2,089,589 to 2,090,467
GFF2052
GFF2053 - tRNA dimethylallyltransferase (EC 2.5.1.75), at 2,090,484 to 2,091,410
GFF2053
GFF2054 - Acetolactate synthase large subunit (EC 2.2.1.6), at 2,091,515 to 2,093,266
GFF2054
GFF2055 - hypothetical protein, at 2,093,263 to 2,093,610
GFF2055
GFF2056 - Acetolactate synthase small subunit (EC 2.2.1.6), at 2,093,610 to 2,094,125
GFF2056
Group
Condition
GFF2052
GFF2053
GFF2054
GFF2055
GFF2056
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-4.2
-1.7
-4.4
-0.3
-4.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-4.6
-0.4
-4.7
-0.2
-4.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-3.9
-1.2
-4.1
-0.3
-4.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-4.4
-0.7
-4.4
-0.0
-4.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-3.9
-0.7
-4.3
-0.4
-4.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-4.0
-0.3
-4.2
-0.4
-4.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-3.8
-1.0
-4.2
-0.1
-4.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-3.8
-0.9
-4.0
-0.2
-4.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-3.3
-1.4
-3.7
-0.6
-3.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-3.2
-1.0
-3.6
-1.0
-3.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-4.3
-1.5
-3.3
+0.0
-2.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-2.9
-1.7
-3.3
-0.4
-3.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-2.8
-0.9
-3.4
-0.6
-3.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-4.2
-0.6
-3.2
+0.0
-3.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-3.0
-1.0
-3.3
-0.4
-3.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-2.7
-1.3
-2.9
-0.4
-3.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-3.5
-0.8
-2.8
+0.0
-3.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-3.4
-1.1
-2.9
+0.2
-3.3
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