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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2036 and GFF2037 are separated by 39 nucleotides
GFF2037 and GFF2038 are separated by 119 nucleotides
GFF2038 and GFF2039 are separated by 116 nucleotides
GFF2039 and GFF2040 are separated by 55 nucleotides
GFF2036 - 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18), at 2,067,185 to 2,069,359
GFF2036
GFF2037 - Glycogen phosphorylase (EC 2.4.1.1), at 2,069,399 to 2,071,864
GFF2037
GFF2038 - Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily, at 2,071,984 to 2,073,189
GFF2038
GFF2039 - RNA polymerase ECF-type sigma factor, at 2,073,306 to 2,073,860
GFF2039
GFF2040 - hypothetical protein, at 2,073,916 to 2,074,845
GFF2040
Group
Condition
GFF2036
GFF2037
GFF2038
GFF2039
GFF2040
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-1.0
-0.0
-0.2
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.8
-0.0
+0.0
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.7
+0.0
-0.1
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.7
-0.1
-0.1
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.2
-0.1
-0.1
+0.0
+0.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.9
-0.0
+0.0
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
+0.0
-0.1
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.0
+0.1
+0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.7
-0.1
-0.1
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
-0.1
-0.0
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.9
-0.0
-0.1
+0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.7
-0.1
+0.0
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
+0.0
-0.0
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.7
-0.1
+0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
-0.0
-0.0
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.5
+0.0
-0.2
+0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.6
-0.0
+0.1
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.6
-0.2
+0.2
+0.0
+0.2
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