Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_10360	PS417_10365	PS417_10370	PS417_10375	PS417_10380
stress	LB_noSalt with Chloride 1100 mM	-0.5	-0.4	-0.7	N.D.	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	-0.6	-0.7	N.D.	+0.0
agar plate interaction control	Taped volatile agar plate with no fungus	-1.0	-0.1	-0.4	N.D.	+0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.4	-0.1	-0.9	N.D.	+0.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.1	+0.2	-0.9	N.D.	-0.6
seeds	Growth on radish seeds for 72 hours	-0.4	-0.6	+0.2	N.D.	-0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.5	+0.1	-0.7	N.D.	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-0.5	-0.5	N.D.	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5	+0.1	-0.7	N.D.	+0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.5	+0.1	-1.3	N.D.	+0.0
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8	-0.0	-0.2	N.D.	+0.4
soil	soil sample 3; outgrowth in LB	+0.4	-0.1	-0.5	N.D.	-0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.4	+0.4	-0.2	N.D.	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.1	+0.5	-0.9	N.D.	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	+0.6	-0.8	N.D.	+0.1
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.5	-0.4	+0.3	N.D.	+0.2
phage	P. simiae Grant Run MOI 0.1	-0.2	-0.6	+0.3	N.D.	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.3	+0.3	+0.5	N.D.	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	+0.3	-0.5	N.D.	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-0.3	+0.5	N.D.	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-0.5	+0.4	N.D.	+0.6
stress	1-ethyl-3-methylimidazolium acetate 35 mM	+0.3	-0.5	+0.3	N.D.	+0.3
phage	P. simiae OR Antrim MOI 10	+0.8	-0.3	-0.2	N.D.	+0.2
phage	P. simiae OR Antrim MOI 1	-0.2	-0.4	+1.0	N.D.	+0.0
phage	P. simiae OR Antrim MOI 1	+0.0	-0.6	+0.9	N.D.	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4	-0.0	+0.8	N.D.	+0.2
phage	P. simiae OR1 MOI 0.1	-0.4	-0.0	+0.9	N.D.	+0.2
ecofab	LB in EcoFAB_3.5mL	+0.5	-0.1	+0.8	N.D.	-0.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.1	+0.5	+0.5	N.D.	+0.2
phage	P. simiae Grant Run MOI 10	+0.3	+0.5	+0.4	N.D.	+0.4