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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2030 and GFF2031 are separated by 20 nucleotides
GFF2031 and GFF2032 are separated by 121 nucleotides
GFF2032 and GFF2033 are separated by 96 nucleotides
GFF2033 and GFF2034 overlap by 4 nucleotides
GFF2030 - hypothetical protein, at 2,060,071 to 2,060,580
GFF2030
GFF2031 - hypothetical protein, at 2,060,601 to 2,061,665
GFF2031
GFF2032 - hypothetical protein, at 2,061,787 to 2,062,419
GFF2032
GFF2033 - Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196), at 2,062,516 to 2,064,420
GFF2033
GFF2034 - Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), at 2,064,417 to 2,065,862
GFF2034
Group
Condition
GFF2030
GFF2031
GFF2032
GFF2033
GFF2034
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.0
-0.1
-0.1
-2.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
+0.1
-0.1
-2.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
-0.1
+0.1
-2.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.1
-0.7
-0.0
-1.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
+0.0
+0.1
-0.0
-2.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.1
-0.5
+0.2
-1.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.0
+0.2
-0.0
-2.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.0
+0.2
+0.1
-2.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.6
+0.3
+0.3
-1.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
+0.2
-0.0
-1.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.2
-0.1
-0.1
-1.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
+0.2
+0.1
-1.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
+0.0
-0.1
-1.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.2
-0.2
+0.1
-0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
+0.1
+0.1
-1.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.1
+0.3
-0.1
-1.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.1
-0.0
-0.0
-1.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.0
+0.2
-0.0
-1.2
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