Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF2028 and GFF2029 are separated by 131 nucleotidesGFF2029 and GFF2030 are separated by 114 nucleotidesGFF2030 and GFF2031 are separated by 183 nucleotidesGFF2031 and GFF2032 are separated by 186 nucleotides GFF2028 - Uncharacterized MFS-type transporter, at 70,379 to 72,073 GFF2028 GFF2029 - FIG00347684: hypothetical protein, at 72,205 to 72,354 GFF2029 GFF2030 - ABC-type branched-chain amino acid transport systems, periplasmic component, at 72,469 to 73,581 GFF2030 GFF2031 - ABC-type branched-chain amino acid transport systems, periplasmic component, at 73,765 to 74,877 GFF2031 GFF2032 - Excinuclease ABC subunit A, dimeric form, at 75,064 to 80,907 GFF2032
Group Condition GFF2028 GFF2029 GFF2030 GFF2031 GFF2032
complex community Community=arabino-guar; Passage=4 -0.3 N.D. -1.5 +0.4 -0.2
complex community Community=Locust bean gum; Passage=4 -0.5 N.D. -0.8 +0.1 -0.3
complex community Community=Locust bean gum; Passage=4 -0.2 N.D. -0.8 -0.2 +0.0
complex community Community=arabino-guar; Passage=4 -0.4 N.D. -0.2 +0.0 -0.2
phage phage_bap4 -0.1 N.D. -0.2 -0.3 -0.1
complex community Community=arabino-guar; Passage=4 -0.1 N.D. -0.4 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 N.D. -0.5 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 N.D. -0.2 -0.1 +0.0
complex community Community=Locust bean gum; Passage=4 -0.4 N.D. -0.2 +0.3 +0.1
complex community Community=guar; Passage=4 -0.3 N.D. +0.0 +0.3 -0.3
phage phage_bap4 -0.2 N.D. +0.3 -0.2 -0.1
phage phage_bap4 -0.3 N.D. +0.3 -0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 N.D. +0.2 -0.3 +0.0
complex community Community=guar; Passage=4 -0.4 N.D. +0.8 -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 N.D. -0.2 +0.2 -0.0
no phage control no phage control -0.1 N.D. +0.3 -0.1 -0.1
no phage control no phage control -0.1 N.D. +0.2 -0.2 -0.0
complex community Community=arabino-guar; Passage=4 -0.4 N.D. +0.4 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 N.D. +0.2 -0.1 -0.0
complex community Community=guar; Passage=4 -0.2 N.D. +0.0 +0.4 -0.2
phage phage_bap4 -0.1 N.D. +0.3 -0.1 -0.0
complex community Community=Kojac gum; Passage=1 -0.2 N.D. +0.1 +0.2 -0.0
phage phage_bap4 -0.1 N.D. +0.3 +0.1 -0.0
complex community Community=guar; Passage=4 -0.3 N.D. +0.3 +0.4 -0.1
phage phage_bap4 -0.1 N.D. +0.5 -0.1 +0.0
phage phage_bap4 -0.0 N.D. +0.5 -0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 N.D. +0.5 -0.0 +0.0
complex community Community=Locust bean gum; Passage=4 -0.1 N.D. +0.6 +0.1 -0.1
complex community Community=Kojac gum; Passage=4 -0.0 N.D. +0.4 +0.5 -0.0
phage phage_bap4 +0.0 N.D. +0.5 +0.3 +0.1
remove
GFF2028
plot		 remove
GFF2029
plot		 remove
GFF2030		 remove
GFF2031
plot		 remove
GFF2032
plot