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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF201 and GFF202 are separated by 126 nucleotides
GFF202 and GFF203 are separated by 21 nucleotides
GFF203 and GFF204 are separated by 247 nucleotides
GFF204 and GFF205 are separated by 42 nucleotides
GFF201 - Probable ferredoxin oxidoreductase oxidoreductase protein (EC 1.-.-.- ), at 228,751 to 229,740
GFF201
GFF202 - Transcriptional regulator, LysR family, at 229,867 to 230,781
GFF202
GFF203 - hypothetical protein, at 230,803 to 231,339
GFF203
GFF204 - hypothetical protein, at 231,587 to 232,216
GFF204
GFF205 - Nitroreductase family protein, at 232,259 to 232,879
GFF205
Group
Condition
GFF201
GFF202
GFF203
GFF204
GFF205
complex community
Community=guar; Passage=4
-0.2
-0.4
+0.2
+0.4
-1.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
+0.0
+0.2
-0.1
-0.7
complex community
Community=guar; Passage=4
+0.3
-0.1
+0.1
-0.2
-0.9
complex community
Community=guar; Passage=4
+0.3
-0.4
-0.1
-0.0
-0.5
complex community
Community=arabino-guar; Passage=4
-0.3
+0.0
-0.1
-0.4
+0.2
complex community
Community=arabino-guar; Passage=4
-0.3
+0.0
-0.6
-0.0
+0.2
complex community
Community=Kojac gum; Passage=4
-0.3
-0.2
+0.0
-0.0
-0.1
complex community
Community=arabino-guar; Passage=4
-0.2
-0.3
-0.4
+0.4
-0.0
phage
phage_bap4
-0.2
-0.0
-0.1
-0.2
+0.1
phage
phage_bap4
-0.2
+0.2
-0.3
+0.2
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
+0.1
+0.2
-0.1
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.1
+0.2
-0.1
-0.3
phage
phage_bap4
-0.2
-0.0
-0.0
+0.2
-0.3
phage
phage_bap4
-0.2
-0.1
-0.1
+0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-0.0
+0.3
-0.1
-0.5
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
+0.1
+0.2
+0.0
-0.6
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.1
+0.1
+0.5
-0.3
-0.4
vitamin
M9 with Supernatant from Cyptococcus
+0.1
+0.3
+0.0
-0.1
-0.2
vitamin
M9 with Supernatant from Cyptococcus
-0.1
+0.2
+0.2
-0.2
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
+0.1
+0.2
-0.1
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.1
+0.1
+0.4
-0.0
-0.3
complex community
Community=Locust bean gum; Passage=4
-0.5
+0.1
+0.2
-0.1
+0.4
complex community
Community=arabino-guar; Passage=4
+0.3
+0.4
-0.3
+0.3
-0.5
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.3
-0.1
+0.2
-0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
+0.2
+0.3
+0.1
+0.0
complex community
Community=guar; Passage=4
+0.2
+0.2
+0.1
-0.3
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.0
+0.0
-0.1
+0.4
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
+0.1
+0.2
-0.0
+0.3
complex community
Community=Locust bean gum; Passage=4
+0.3
+0.2
-0.2
+0.1
+0.5
complex community
Community=Locust bean gum; Passage=4
-0.2
+0.0
+0.3
-0.1
+0.9
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