Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2015 and GFF2016 are separated by 6 nucleotidesGFF2016 and GFF2017 are separated by 81 nucleotidesGFF2017 and GFF2018 are separated by 93 nucleotidesGFF2018 and GFF2019 overlap by 4 nucleotides GFF2015 - Probable glutathione S-transferase (EC 2.5.1.18), YfcF homolog, at 60,341 to 60,961 GFF2015 GFF2016 - hypothetical protein, at 60,968 to 61,282 GFF2016 GFF2017 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 61,364 to 62,284 GFF2017 GFF2018 - Transcriptional regulator, IclR family, at 62,378 to 63,127 GFF2018 GFF2019 - FIG00976956: hypothetical protein, at 63,124 to 63,519 GFF2019
Group Condition GFF2015 GFF2016 GFF2017 GFF2018 GFF2019
complex community Community=Locust bean gum; Passage=4 -0.4 -0.0 -0.7 -0.3 -0.1
complex community Community=Locust bean gum; Passage=4 -1.2 +0.4 -0.3 -0.1 -0.1
complex community Community=Kojac gum; Passage=4 -0.2 -0.1 -0.6 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.7 +0.0 -0.0 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.5 +0.2 -0.2 -0.2 -0.2
complex community Community=Locust bean gum; Passage=4 -1.1 -0.1 +0.2 -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 -0.0 -0.1 -0.1 -0.1
phage phage_bap4 -0.1 +0.1 -0.5 -0.3 +0.1
no phage control no phage control -0.4 -0.0 +0.0 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.0 -0.3 -0.1 +0.1
complex community Community=guar; Passage=4 -0.5 -0.2 +0.3 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.1 +0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.1 -0.2 +0.1 +0.1
phage phage_bap4 -0.1 +0.1 -0.5 +0.0 +0.1
phage phage_bap4 -0.3 +0.1 +0.1 +0.1 -0.2
phage phage_bap4 -0.3 +0.1 +0.1 -0.1 +0.0
phage phage_bap4 +0.0 +0.0 -0.2 -0.2 +0.2
complex community Community=Locust bean gum; Passage=4 -1.3 +0.1 +0.7 +0.0 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 -0.1 +0.0 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.6 +0.3 +0.2 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 -0.0 +0.1 -0.3 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 -0.0 +0.2 +0.0 -0.2
complex community Community=arabino-guar; Passage=4 -0.4 +0.1 +0.2 -0.4 +0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.1 +0.3 -0.0 +0.1
complex community Community=guar; Passage=4 +0.5 +0.0 -0.3 -0.3 +0.4
complex community Community=guar; Passage=4 +0.0 +0.1 +0.5 -0.4 +0.0
complex community Community=arabino-guar; Passage=4 +0.2 +0.2 +0.1 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.6 -0.1 -0.1 +0.0 +0.1
complex community Community=guar; Passage=4 +0.3 +0.2 +0.4 -0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus +0.4 +0.1 +0.3 +0.0 +0.0
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