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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2013 and GFF2014 are separated by 243 nucleotides
GFF2014 and GFF2015 are separated by 31 nucleotides
GFF2015 and GFF2016 are separated by 193 nucleotides
GFF2016 and GFF2017 are separated by 38 nucleotides
GFF2013 - Mobile element protein, at 2,037,407 to 2,037,685
GFF2013
GFF2014 - Glycerol kinase (EC 2.7.1.30), at 2,037,929 to 2,039,419
GFF2014
GFF2015 - Glycerol uptake facilitator protein, at 2,039,451 to 2,040,278
GFF2015
GFF2016 - Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3), at 2,040,472 to 2,042,037
GFF2016
GFF2017 - Glycerol-3-phosphate regulon repressor GlpR, at 2,042,076 to 2,042,873
GFF2017
Group
Condition
GFF2013
GFF2014
GFF2015
GFF2016
GFF2017
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
N.D.
+0.4
N.D.
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+1.0
N.D.
-0.3
N.D.
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.6
N.D.
+0.1
N.D.
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
N.D.
+0.3
N.D.
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.6
N.D.
+0.0
N.D.
+0.7
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
N.D.
+0.4
N.D.
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.6
N.D.
+0.3
N.D.
+0.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.7
N.D.
+0.3
N.D.
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
N.D.
+0.6
N.D.
+0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.7
N.D.
+0.6
N.D.
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.8
N.D.
+0.3
N.D.
+0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+1.0
N.D.
+0.4
N.D.
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.6
N.D.
+0.6
N.D.
+0.7
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.8
N.D.
+0.4
N.D.
+0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.9
N.D.
+0.2
N.D.
+0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+1.1
N.D.
+0.3
N.D.
+0.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+1.8
N.D.
+0.1
N.D.
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+1.2
N.D.
+0.9
N.D.
+0.8
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