Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_10255	PS417_10260	PS417_10265	PS417_10270	PS417_10275
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	-0.7	-1.7	+0.0	-1.2
seeds	Growth on radish seeds for 72 hours	-0.1	-0.2	-0.3	-0.6	-1.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-0.1	-1.6	+0.1	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	-0.3	-1.4	-0.5	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.3	-0.3	-0.8	+0.0	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	-0.2	-2.1	-0.5	+0.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	+0.2	-0.3	+0.1	-2.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	+0.3	-0.8	+0.6	-2.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-0.2	+0.3	+0.6	-2.4
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3	-0.4	-1.9	-0.0	+0.4
stress	LB_noSalt with Chloride 1100 mM	+0.1	-0.0	-1.6	-0.1	-0.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.0	-0.1	-1.1	+0.2	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.1	-0.3	-0.9	+0.1	-0.8
liquid stress	Fraxetin 3 mM; liquid stress	+0.1	-0.3	-1.1	-0.6	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.1	+0.4	-0.1	-1.3
liquid stress	Scopoletin 3 mM; liquid stress	+0.3	-0.1	-1.8	+0.1	+0.2
phage	P. simiae ORA MOI 0.1	-0.3	-0.2	-0.9	+0.4	+0.8
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.7	+0.1	-0.5	+0.4	-0.7
seeds	Growth on radish seeds for 72 hours	+0.6	+0.2	+0.4	-0.5	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.1	+0.5	+0.9	-0.1	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	+0.7	+0.6	+0.4	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.1	-0.3	+2.0	-0.3	-0.3
nophagecontrol	Only library	-0.5	+0.5	+0.8	-0.5	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.5	-0.3	-0.1	+0.6	+1.5
stress	methylglyoxal 0.032 vol%	-0.2	-0.2	+0.2	+0.8	+1.0
carbon source	Carbon source D-Mannitol 5 mM	+0.1	-0.4	+0.8	+0.5	+0.9
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.1	-0.0	+1.9	-0.5	+0.6
phage	P. simiae OR Antrim MOI 10	-0.2	+0.7	+0.4	+0.2	+1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3	+1.0	+0.7	+0.4	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	+0.3	+2.6	-0.1	+0.6