Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2010 and GFF2011 are separated by 1 nucleotidesGFF2011 and GFF2012 are separated by 15 nucleotidesGFF2012 and GFF2013 are separated by 110 nucleotidesGFF2013 and GFF2014 are separated by 58 nucleotides GFF2010 - Methylglutaconyl-CoA hydratase (EC 4.2.1.18), at 55,157 to 55,963 GFF2010 GFF2011 - hypothetical protein, at 55,965 to 56,468 GFF2011 GFF2012 - Putative transmembrane protein, at 56,484 to 57,158 GFF2012 GFF2013 - Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4), at 57,269 to 59,272 GFF2013 GFF2014 - hypothetical protein, at 59,331 to 60,296 GFF2014
Group Condition GFF2010 GFF2011 GFF2012 GFF2013 GFF2014
complex community Community=arabino-guar; Passage=4 -0.6 -0.4 -0.8 -1.1 -0.6
complex community Community=arabino-guar; Passage=4 -1.1 -0.0 -1.0 -0.9 -0.3
complex community Community=guar; Passage=4 -0.3 -0.6 -1.0 -0.8 -0.3
complex community Community=arabino-guar; Passage=4 -0.3 -0.7 -0.4 -0.7 +0.1
complex community Community=guar; Passage=4 -0.8 +0.2 -0.2 -1.0 +0.2
complex community Community=guar; Passage=4 -0.3 -0.3 +0.0 -1.0 +0.0
complex community Community=arabino-guar; Passage=4 -0.6 +0.3 +0.4 -0.9 -0.5
phage phage_bap4 -0.5 -0.1 -0.0 -0.3 -0.2
no phage control no phage control -0.6 +0.1 -0.0 -0.3 -0.3
no phage control no phage control -0.5 +0.2 -0.3 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.2 -0.2 -0.2 -0.4
complex community Community=Locust bean gum; Passage=4 -0.3 -0.6 +0.2 -1.0 +0.6
no phage control no phage control -0.6 +0.1 -0.2 -0.3 +0.1
phage phage_bap4 -0.4 +0.0 -0.1 -0.3 -0.2
complex community Community=guar; Passage=4 -0.2 -0.3 +0.1 -0.9 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.1 +0.2 -0.0 -0.8
no phage control no phage control -0.3 +0.3 -0.3 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.2 -0.3 -0.0 -0.3
complex community Community=Kojac gum; Passage=1 -0.3 -0.0 -0.3 -0.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.2 -0.4 -0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.2 +0.0 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.3 -0.1 -0.2 -0.4
phage phage_bap4 -0.1 +0.3 +0.0 -0.3 -0.2
phage phage_bap4 -0.3 +0.2 +0.1 -0.3 +0.1
complex community Community=Locust bean gum; Passage=4 +0.3 -0.8 +0.3 -0.6 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.1 -0.5 -0.1 +0.3
complex community Community=Locust bean gum; Passage=4 +0.3 -0.3 +0.3 -0.5 +0.2
complex community Community=Kojac gum; Passage=4 -0.1 +0.3 -0.4 -0.5 +0.8
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 +0.0 -0.3 -0.1 +0.4
complex community Community=Locust bean gum; Passage=4 -0.0 -0.4 +0.0 -0.1 +0.8
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