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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2009 and GFF2010 are separated by 858 nucleotides
GFF2010 and GFF2011 are separated by 143 nucleotides
GFF2011 and GFF2012 are separated by 154 nucleotides
GFF2012 and GFF2013 are separated by 80 nucleotides
GFF2009 - Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57), at 2,032,479 to 2,033,645
GFF2009
GFF2010 - Arylsulfatase (EC 3.1.6.1), at 2,034,504 to 2,035,196
GFF2010
GFF2011 - Transposase, IS110 and IS111A family, at 2,035,340 to 2,036,632
GFF2011
GFF2012 - Integrase, at 2,036,787 to 2,037,326
GFF2012
GFF2013 - Mobile element protein, at 2,037,407 to 2,037,685
GFF2013
Group
Condition
GFF2009
GFF2010
GFF2011
GFF2012
GFF2013
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
+0.2
+0.6
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
+0.4
+0.5
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.2
+0.3
+0.3
+0.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.3
+0.3
+0.9
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
+0.3
+0.7
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
+0.2
+0.6
+0.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
+0.3
+0.6
+0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.1
+0.2
+0.7
+1.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
+0.2
+0.5
+1.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
+0.4
+0.7
+0.7
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
+0.3
+0.5
+0.8
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
+0.2
+0.7
+0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.4
+0.7
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.2
+0.4
+0.4
+1.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.2
+0.3
+0.9
+1.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.2
+0.3
+1.0
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
+0.3
+0.9
+0.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.2
+0.2
+0.6
+1.8
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