Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2008 and GFF2009 are separated by 21 nucleotidesGFF2009 and GFF2010 are separated by 16 nucleotidesGFF2010 and GFF2011 are separated by 1 nucleotidesGFF2011 and GFF2012 are separated by 15 nucleotides GFF2008 - Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4), at 52,624 to 54,252 GFF2008 GFF2009 - Dienelactone hydrolase and related enzymes, at 54,274 to 55,140 GFF2009 GFF2010 - Methylglutaconyl-CoA hydratase (EC 4.2.1.18), at 55,157 to 55,963 GFF2010 GFF2011 - hypothetical protein, at 55,965 to 56,468 GFF2011 GFF2012 - Putative transmembrane protein, at 56,484 to 57,158 GFF2012
Group Condition GFF2008 GFF2009 GFF2010 GFF2011 GFF2012
complex community Community=arabino-guar; Passage=4 -1.7 -0.2 -1.1 -0.0 -1.0
complex community Community=guar; Passage=4 -1.6 -0.5 -0.3 -0.6 -1.0
complex community Community=arabino-guar; Passage=4 -1.6 +0.1 -0.6 -0.4 -0.8
complex community Community=Locust bean gum; Passage=4 -1.1 -0.8 -0.3 -0.6 +0.2
complex community Community=arabino-guar; Passage=4 -1.3 +0.2 -0.3 -0.7 -0.4
complex community Community=guar; Passage=4 -1.2 -0.3 -0.8 +0.2 -0.2
complex community Community=guar; Passage=4 -1.7 -0.1 -0.3 -0.3 +0.0
complex community Community=guar; Passage=4 -1.5 -0.2 -0.2 -0.3 +0.1
complex community Community=Kojac gum; Passage=4 -1.2 -0.2 -0.1 +0.3 -0.4
complex community Community=Kojac gum; Passage=1 -0.5 -0.4 -0.3 -0.0 -0.3
complex community Community=Locust bean gum; Passage=4 -0.7 -0.3 -0.0 -0.4 +0.0
complex community Community=Locust bean gum; Passage=4 -1.2 -0.4 +0.3 -0.3 +0.3
complex community Community=arabino-guar; Passage=4 -1.6 +0.2 -0.6 +0.3 +0.4
complex community Community=Locust bean gum; Passage=4 -1.3 +0.3 +0.3 -0.8 +0.3
no phage control no phage control -0.3 -0.2 -0.6 +0.1 -0.2
phage phage_bap4 -0.2 -0.2 -0.5 -0.1 -0.0
no phage control no phage control -0.3 +0.0 -0.5 +0.2 -0.3
phage phage_bap4 -0.3 -0.1 -0.4 +0.0 -0.1
no phage control no phage control -0.1 -0.0 -0.6 +0.1 -0.0
no phage control no phage control -0.2 -0.1 -0.3 +0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.2 -0.1 +0.2 -0.3
complex community Community=Locust bean gum; Passage=1 -0.6 -0.0 -0.1 +0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.2 +0.3 -0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.1 +0.1 +0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 -0.1 -0.2 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.4 -0.1 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.2 +0.2 -0.2 +0.1
phage phage_bap4 -0.2 -0.0 -0.3 +0.2 +0.1
phage phage_bap4 -0.3 +0.1 -0.1 +0.3 +0.0
phage phage_bap4 +0.2 -0.2 -0.0 +0.2 +0.3
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