Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2003 and GFF2004 overlap by 4 nucleotidesGFF2004 and GFF2005 overlap by 4 nucleotidesGFF2005 and GFF2006 are separated by 140 nucleotidesGFF2006 and GFF2007 are separated by 143 nucleotides GFF2003 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 47,013 to 48,014 GFF2003 GFF2004 - no description, at 48,011 to 48,466 GFF2004 GFF2005 - Transcriptional regulator, AraC family, at 48,463 to 49,491 GFF2005 GFF2006 - Isovaleryl-CoA dehydrogenase (EC 1.3.8.4), at 49,632 to 50,804 GFF2006 GFF2007 - Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16), at 50,948 to 52,627 GFF2007
Group Condition GFF2003 GFF2004 GFF2005 GFF2006 GFF2007
complex community Community=guar; Passage=4 -0.5 -0.4 -0.3 -1.0 -0.2
complex community Community=Locust bean gum; Passage=4 -0.1 -0.1 -0.4 -0.7 -0.2
complex community Community=arabino-guar; Passage=4 -0.3 -0.3 -0.2 -0.6 -0.1
complex community Community=guar; Passage=4 +0.5 -0.4 +0.1 -1.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.1 -0.5 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.4 +0.2 -0.1 -0.6 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 -0.3 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.1 -0.2 -0.0 -0.3
complex community Community=guar; Passage=4 -0.1 +0.2 +0.0 -0.8 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 -0.6 -0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.0 -0.2 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.0 -0.3 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 +0.0 +0.3 -0.1 -0.8 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.1 -0.4 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.1 -0.4 -0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.1 -0.3 -0.3 -0.0
complex community Community=Locust bean gum; Passage=4 +0.1 +0.1 -0.5 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 +0.4 -0.1 +0.2 -0.7 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 -0.4 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 -0.1 -0.5 -0.2 +0.0
complex community Community=Locust bean gum; Passage=4 +0.6 -0.1 -0.7 -0.3 +0.3
complex community Community=guar; Passage=4 +0.4 -0.2 -0.3 -0.5 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.1 +0.1 -0.2 -0.2
phage phage_bap4 -0.2 -0.1 +0.1 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.5 +0.0 -0.2 -0.2 -0.2
complex community Community=Locust bean gum; Passage=1 +0.3 +0.2 -0.1 -0.3 -0.1
complex community Community=arabino-guar; Passage=4 +0.4 +0.0 +0.2 -0.6 +0.2
phage phage_bap4 +0.2 -0.1 +0.0 +0.2 +0.1
complex community Community=Kojac gum; Passage=4 +0.3 +0.4 -0.1 -0.4 +0.2
phage phage_bap4 +0.3 -0.0 +0.3 -0.1 +0.0
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