Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF1998 and GFF1999 are separated by 10 nucleotidesGFF1999 and GFF2000 are separated by 111 nucleotidesGFF2000 and GFF2001 are separated by 16 nucleotidesGFF2001 and GFF2002 are separated by 47 nucleotides GFF1998 - Fumarate reductase subunit C, at 13,230 to 13,625 GFF1998 GFF1999 - Fumarate reductase subunit D, at 13,636 to 13,995 GFF1999 GFF2000 - Outer membrane lipoprotein Blc, at 14,107 to 14,640 GFF2000 GFF2001 - Quaternary ammonium compound-resistance protein SugE, at 14,657 to 14,974 GFF2001 GFF2002 - hypothetical protein, at 15,022 to 15,150 GFF2002
Group Condition GFF1998 GFF1999 GFF2000 GFF2001 GFF2002
phage LB_plus_SM_buffer with 6C2_phage 0.25 MOI +0.3 -0.1 +0.0 -2.4 -0.0
phage LB_plus_SM_buffer with P22_phage 15 MOI +0.1 +0.5 +1.0 -1.9 -1.4
phage 6F2_phage 15 MOI +0.2 +0.2 +0.3 -2.3 -0.2
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.4 -0.3 -0.2 -0.8 +0.2
phage Ffm_phage 10 MOI; agar plate assay -0.0 -0.9 -0.0 -1.1 +0.9
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI +0.0 -0.4 +0.3 -0.8 -0.0
phage LB_plus_SM_buffer with Ffm_phage 0.01875 MOI -0.0 -0.2 +0.3 -0.4 -0.4
phage 6H2_phage 10 MOI; agar plate assay +0.1 +0.4 +0.8 -0.9 -1.1
phage LB_plus_SM_buffer with 6F2_phage 15 MOI -0.5 -0.5 +0.1 +0.2 -0.0
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.3 -0.1 +0.3 -0.9 +0.4
phage LB_plus_SM_buffer with phi19h1_phage 0.01875 MOI +0.1 -0.3 -0.2 -0.5 +0.5
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.3 -0.5 -0.1 +0.3 +0.2
phage 6F2_phage 15 MOI +0.2 -0.2 +0.2 -0.9 +0.4
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.3 -0.5 -0.2 +0.1 +0.7
phage LB_plus_SM_buffer with 6C2_phage 15 MOI -0.4 -0.3 +0.0 +0.4 +0.2
micoeukaryotes C.elegans, mixed culture-1 -0.2 -0.5 -0.0 +0.4 +0.4
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI -0.4 -0.2 -0.2 +0.3 +0.6
lb_plus_sm_buffer LB_plus_SM_buffer +0.2 +0.4 +0.2 -0.6 +0.1
phage LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI -0.2 -0.2 +0.2 +0.6 +0.2
lb_plus_sm_buffer LB_plus_SM_buffer -0.1 +0.2 -0.1 +0.9 -0.3
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI -0.1 -0.3 -0.1 +0.6 +0.5
nophagecontrol No phage control +0.5 +0.4 +0.0 -0.5 +0.1
micoeukaryotes C.elegans, mixed culture-2 -0.3 -0.0 +0.2 +0.8 -0.0
phage LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI -0.1 -0.2 +0.1 +0.8 +0.1
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.0 +0.1 +0.4 +0.2 +0.5
phage 6F2_phage 15 MOI +0.1 +0.1 +0.5 +0.5 +0.2
phage Br60_phage 15 MOI +0.3 +0.0 +0.3 +0.8 +0.3
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI +1.3 -0.2 +1.6 -0.3 +0.0
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI +0.2 +0.0 +0.9 +1.6 +0.0
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI -0.1 -0.5 +0.9 -0.2 +2.8
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