Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF1996 and GFF1997 overlap by 8 nucleotidesGFF1997 and GFF1998 are separated by 10 nucleotidesGFF1998 and GFF1999 are separated by 10 nucleotidesGFF1999 and GFF2000 are separated by 111 nucleotides GFF1996 - Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1), at 10,702 to 12,492 GFF1996 GFF1997 - Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1), at 12,485 to 13,219 GFF1997 GFF1998 - Fumarate reductase subunit C, at 13,230 to 13,625 GFF1998 GFF1999 - Fumarate reductase subunit D, at 13,636 to 13,995 GFF1999 GFF2000 - Outer membrane lipoprotein Blc, at 14,107 to 14,640 GFF2000
Group Condition GFF1996 GFF1997 GFF1998 GFF1999 GFF2000
phage LB_plus_SM_buffer with 6F2_phage 15 MOI -0.3 -0.3 -0.5 -0.5 +0.1
micoeukaryotes C.elegans, mixed culture-1 -0.3 -0.4 -0.2 -0.5 -0.0
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.1 -0.4 -0.3 -0.5 -0.2
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.2 -0.2 -0.4 -0.3 -0.2
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.0 -0.4 -0.3 -0.5 -0.1
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI -0.1 -0.3 -0.4 -0.2 -0.2
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.1 -0.4 -0.5 -0.0 -0.2
phage LB_plus_SM_buffer with 6D2_phage 15 MOI -0.4 -0.5 -0.3 +0.2 -0.0
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.2 -0.5 -0.3 -0.1 +0.0
phage LB_plus_SM_buffer with 6D2_phage 15 MOI -0.2 -0.4 -0.1 -0.2 -0.0
phage LB_plus_SM_buffer with 6C2_phage 15 MOI -0.1 -0.1 -0.4 -0.3 +0.0
phage LB_plus_SM_buffer with 6F2_phage 15 MOI -0.2 -0.3 -0.3 -0.1 -0.1
phage LB_plus_SM_buffer with 6F2_phage 15 MOI -0.5 -0.2 -0.1 -0.1 +0.1
phage Ffm_phage 10 MOI; agar plate assay +0.1 +0.0 -0.0 -0.9 -0.0
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI -0.4 +0.0 +0.0 -0.4 +0.3
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.0 -0.4 +0.4 -0.0 -0.4
phage LB_plus_SM_buffer with 6D2_phage 15 MOI -0.3 -0.3 -0.1 +0.1 +0.3
phage LB_plus_SM_buffer with 8C2_phage 15 MOI -0.0 -0.2 +0.0 -0.2 +0.5
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI -0.0 -0.3 +0.2 +0.0 +0.9
phage Br60_phage 15 MOI +0.2 +0.1 +0.3 +0.0 +0.3
phage LB_plus_SM_buffer with Ffm_phage 15 MOI +0.1 -0.0 +0.0 +0.4 +0.4
phage 6F2_phage 15 MOI +0.2 -0.0 +0.2 +0.2 +0.3
phage phi19h1_phage 15 MOI +0.4 +0.2 +0.2 -0.2 +0.4
nophagecontrol No phage control +0.3 +0.1 +0.2 +0.3 +0.2
lb_plus_sm_buffer LB_plus_SM_buffer +0.2 +0.1 +0.2 +0.4 +0.2
phage LB_plus_SM_buffer with P22_phage 15 MOI +0.1 -0.1 +0.1 +0.5 +1.0
nophagecontrol No phage control +0.4 +0.4 +0.5 +0.4 +0.0
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI +1.1 +0.4 -0.1 -0.5 +0.9
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI -0.1 -0.2 +1.3 -0.2 +1.6
phage 6H2_phage 10 MOI; agar plate assay +0.8 +0.6 +0.1 +0.4 +0.8
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