Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1985 and GFF1986 are separated by 21 nucleotidesGFF1986 and GFF1987 are separated by 68 nucleotidesGFF1987 and GFF1988 overlap by 4 nucleotidesGFF1988 and GFF1989 are separated by 29 nucleotides GFF1985 - Zinc metalloprotease, at 26,774 to 27,754 GFF1985 GFF1986 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 27,776 to 28,546 GFF1986 GFF1987 - Pseudouridine synthase (EC 4.2.1.70), PA2043 type, at 28,615 to 29,535 GFF1987 GFF1988 - Serine/threonine protein kinase, at 29,532 to 30,842 GFF1988 GFF1989 - MBL-fold metallo-hydrolase superfamily, at 30,872 to 31,942 GFF1989
Group Condition GFF1985 GFF1986 GFF1987 GFF1988 GFF1989
complex community Community=Locust bean gum; Passage=4 -1.1 -0.8 -0.2 -0.1 -0.1
complex community Community=Kojac gum; Passage=4 -1.3 -0.7 +0.0 +0.3 -0.1
complex community Community=Locust bean gum; Passage=4 -0.4 -0.1 -0.0 -0.6 +0.1
complex community Community=guar; Passage=4 -0.7 +0.7 -0.1 -0.6 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.3 -0.0 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.4 -0.1 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.5 +0.0 -0.1 -0.1 -0.2
phage phage_bap4 -0.4 -0.1 -0.2 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.4 +0.1 -0.1 -0.0
no phage control no phage control -0.3 -0.1 -0.1 +0.1 -0.1
phage phage_bap4 -0.5 -0.2 +0.0 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.4 -0.1 -0.2 +0.2
complex community Community=arabino-guar; Passage=4 -0.6 +0.9 -0.2 -0.5 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.5 +0.0 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.1 -0.1 +0.3 -0.1
complex community Community=guar; Passage=4 +0.0 +0.3 -0.1 -0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.2 +0.0 -0.1 +0.2
no phage control no phage control -0.4 +0.2 +0.1 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.5 -0.3 -0.1 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.2 -0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.2 -0.1 -0.1 +0.2
complex community Community=guar; Passage=4 -0.4 +1.0 -0.2 +0.1 -0.3
phage phage_bap4 -0.3 +0.2 +0.0 +0.3 +0.1
phage phage_bap4 -0.2 +0.2 +0.0 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 -0.4 +0.4 +0.2 +0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 -0.1 +0.1 +0.3 -0.3
complex community Community=Locust bean gum; Passage=4 -0.3 +0.5 +0.0 -0.1 +0.3
complex community Community=guar; Passage=4 -0.1 +0.0 +0.1 -0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.0 +0.0 +0.1 +0.4
complex community Community=arabino-guar; Passage=4 +0.3 +0.6 -0.2 -0.0 +0.5
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