Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1974 and GFF1975 are separated by 23 nucleotidesGFF1975 and GFF1976 are separated by 153 nucleotidesGFF1976 and GFF1977 are separated by 49 nucleotidesGFF1977 and GFF1978 are separated by 87 nucleotides GFF1974 - hypothetical protein, at 16,864 to 17,187 GFF1974 GFF1975 - hypothetical protein, at 17,211 to 18,329 GFF1975 GFF1976 - Transcriptional regulator, AcrR family, at 18,483 to 19,274 GFF1976 GFF1977 - L-asparaginase (EC 3.5.1.1), at 19,324 to 20,394 GFF1977 GFF1978 - putative membrane-associated phospholipid phosphatase, PAP2 superfamily, at 20,482 to 21,294 GFF1978
Group Condition GFF1974 GFF1975 GFF1976 GFF1977 GFF1978
complex community Community=guar; Passage=4 -0.5 -0.0 -0.5 -0.0 -1.0
complex community Community=Locust bean gum; Passage=4 -0.2 +0.0 -0.1 -0.0 -1.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 -0.2 -0.1 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 +0.0 -0.1 -0.1 +0.2 -1.1
complex community Community=Locust bean gum; Passage=4 -0.0 -0.2 -0.1 -0.9 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.3 +0.0 +0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 -0.0 -0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.0 -0.0 -0.1 -0.3
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 -0.2 +0.1 -0.8
phage phage_bap4 -0.3 +0.1 +0.1 -0.1 -0.4
complex community Community=Locust bean gum; Passage=4 -0.5 -0.2 -0.1 -0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.1 -0.1 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 -0.1 +0.1 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 -0.1 +0.1 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.2 -0.1 -0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -0.0 +0.0 +0.2 -0.1
complex community Community=guar; Passage=4 -0.3 +0.1 +0.1 -0.2 +0.1
complex community Community=arabino-guar; Passage=4 +0.2 -0.1 +0.1 -0.1 -0.3
no phage control no phage control -0.3 +0.0 +0.1 -0.1 +0.1
phage phage_bap4 -0.1 +0.3 +0.1 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.1 -0.1 +0.1 -0.1
complex community Community=arabino-guar; Passage=4 +0.2 +0.0 -0.1 +0.3 -0.4
phage phage_bap4 +0.0 +0.1 +0.1 -0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.0 -0.2 +0.0 +0.0
phage phage_bap4 -0.2 +0.1 +0.1 +0.1 +0.3
phage phage_bap4 +0.2 +0.1 +0.1 -0.1 +0.2
complex community Community=guar; Passage=4 -0.3 +0.2 -0.1 +0.1 +0.7
complex community Community=Kojac gum; Passage=4 +0.0 +0.2 +0.3 +0.4 -0.4
complex community Community=guar; Passage=4 -0.0 +0.1 -0.1 +0.4 +0.3
complex community Community=Locust bean gum; Passage=4 -0.6 +0.4 +0.2 +0.3 +0.6
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GFF1974
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GFF1975
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GFF1978
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