Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF1964 and GFF1965 are separated by 188 nucleotidesGFF1965 and GFF1966 overlap by 1 nucleotidesGFF1966 and GFF1967 are separated by 3 nucleotidesGFF1967 and GFF1968 are separated by 8 nucleotides GFF1964 - Histone acetyltransferase HPA2 and related acetyltransferases, at 6,539 to 7,159 GFF1964 GFF1965 - Magnesium and cobalt efflux protein CorC, at 7,348 to 8,226 GFF1965 GFF1966 - Apolipoprotein N-acyltransferase / Copper homeostasis protein CutE, at 8,226 to 9,800 GFF1966 GFF1967 - FAD linked oxidase-like, at 9,804 to 11,180 GFF1967 GFF1968 - Hydroxymethylpyrimidine ABC transporter, transmembrane component, at 11,189 to 11,995 GFF1968
Group Condition GFF1964 GFF1965 GFF1966 GFF1967 GFF1968
complex community Community=guar; Passage=4 +0.0 +0.6 -1.4 -0.3 -0.3
no phage control no phage control -0.0 -0.2 -0.8 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.2 -0.4 -0.3 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.0 -1.1 +0.1 -0.1
complex community Community=guar; Passage=4 +0.1 +0.1 -1.5 +0.2 -0.1
complex community Community=Locust bean gum; Passage=4 -0.1 +0.2 -1.0 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.6 +0.0 -0.2
complex community Community=Locust bean gum; Passage=4 -0.2 -0.3 -0.3 +0.0 -0.4
complex community Community=arabino-guar; Passage=4 -0.3 -0.3 -0.7 +0.3 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.1 -1.1 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 +0.1 -0.8 +0.2 -0.3
complex community Community=arabino-guar; Passage=4 -0.1 +0.3 -0.6 +0.5 -1.0
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.2 -1.1 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 +0.1 -1.0 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 -0.1 -0.6 +0.2 -0.3
complex community Community=guar; Passage=4 -0.4 -0.2 -0.3 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.4 -0.5 +0.2 +0.1
phage phage_bap4 -0.0 +0.1 -0.7 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 -0.5 +0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 -0.7 +0.2 -0.0
complex community Community=Locust bean gum; Passage=4 -0.4 +0.3 -0.4 -0.2 +0.2
phage phage_bap4 -0.1 +0.2 -0.7 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.0 -0.6 +0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 -0.8 +0.5 -0.0
complex community Community=Locust bean gum; Passage=4 +0.1 +0.6 -1.2 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.3 -0.6 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.3 -0.4 +0.2 -0.2
complex community Community=guar; Passage=4 -0.1 +0.8 -0.7 -0.4 +0.2
complex community Community=Kojac gum; Passage=4 +0.3 +0.1 +0.5 -0.1 -0.4
complex community Community=arabino-guar; Passage=4 -0.1 +0.7 -0.5 +0.4 -0.1
remove
GFF1964
plot		 remove
GFF1965
plot		 remove
GFF1966		 remove
GFF1967
plot		 remove
GFF1968
plot