Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1961 and GFF1962 are separated by 29 nucleotidesGFF1962 and GFF1963 are separated by 145 nucleotidesGFF1963 and GFF1964 are separated by 216 nucleotidesGFF1964 and GFF1965 are separated by 188 nucleotides GFF1961 - Prephenate dehydratase (EC 4.2.1.51) @ Arogenate dehydratase (EC 4.2.1.91), at 3,746 to 4,546 GFF1961 GFF1962 - 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27), at 4,576 to 5,703 GFF1962 GFF1963 - Transcriptional regulator, AsnC family, at 5,849 to 6,322 GFF1963 GFF1964 - Histone acetyltransferase HPA2 and related acetyltransferases, at 6,539 to 7,159 GFF1964 GFF1965 - Magnesium and cobalt efflux protein CorC, at 7,348 to 8,226 GFF1965
Group Condition GFF1961 GFF1962 GFF1963 GFF1964 GFF1965
complex community Community=guar; Passage=4 +0.1 -1.1 +0.1 -0.4 -0.2
complex community Community=arabino-guar; Passage=4 -0.1 -0.5 -0.1 -0.2 -0.4
complex community Community=Locust bean gum; Passage=4 -0.0 -0.3 -0.3 -0.2 -0.3
complex community Community=arabino-guar; Passage=4 +0.0 -0.7 +0.2 -0.3 -0.3
complex community Community=guar; Passage=4 -0.1 -1.2 -0.2 +0.0 +0.6
complex community Community=guar; Passage=4 +0.1 -1.0 +0.0 +0.1 +0.1
no phage control no phage control -0.0 -0.2 -0.0 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.0 -0.2 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.1 -0.1 -0.1 -0.4
phage phage_bap4 +0.0 -0.1 -0.0 -0.1 -0.2
complex community Community=guar; Passage=4 +0.1 -1.2 +0.0 -0.1 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.0 -0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 -0.1 -0.0 -0.2
phage phage_bap4 -0.0 -0.2 -0.1 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.1 -0.2 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 +0.1 -0.2 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.0 -0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.0 -0.0 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.2 -0.5 -0.1 -0.1 +0.7
phage phage_bap4 -0.0 -0.2 +0.1 -0.1 +0.2
complex community Community=arabino-guar; Passage=4 +0.0 -0.5 +0.3 -0.1 +0.3
complex community Community=Locust bean gum; Passage=4 -0.2 -0.1 +0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.0 -0.0 -0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.0 -0.2 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.0 -0.0 -0.1 +0.3
complex community Community=Kojac gum; Passage=4 -0.1 -0.1 +0.0 +0.3 +0.1
complex community Community=Kojac gum; Passage=1 +0.0 -0.1 -0.0 +0.0 +0.3
complex community Community=Locust bean gum; Passage=4 +0.3 -0.1 +0.2 -0.4 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.0 -0.0 +0.2 +0.2
complex community Community=Locust bean gum; Passage=4 +0.3 -0.3 -0.1 +0.1 +0.6
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