Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF1934 and GFF1935 are separated by 9 nucleotidesGFF1935 and GFF1936 are separated by 111 nucleotidesGFF1936 and GFF1937 overlap by 17 nucleotidesGFF1937 and GFF1938 are separated by 25 nucleotides GFF1934 - Rubredoxin-NAD(+) reductase (EC 1.18.1.1), at 809,254 to 810,477 GFF1934 GFF1935 - hypothetical protein, at 810,487 to 810,888 GFF1935 GFF1936 - Type III restriction-modification enzyme, helicase subunit, at 811,000 to 811,746 GFF1936 GFF1937 - Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-), at 811,730 to 812,770 GFF1937 GFF1938 - Transcriptional regulator, LysR family, at 812,796 to 813,701 GFF1938
Group Condition GFF1934 GFF1935 GFF1936 GFF1937 GFF1938
carbon source Ying_all64 rep C; time point 3 -0.3 -0.9 N.D. +0.1 -0.1
carbon source Ying_AminoAcid20 rep A; time point 3 -0.4 -0.2 N.D. -0.1 -0.4
carbon source Ying_Nucleobase14 rep B; time point 2 -0.1 -0.5 N.D. +0.1 -0.3
carbon source Ying_Others16 rep A; time point 3 -0.4 -0.1 N.D. -0.2 +0.1
carbon source Ying_Others16 rep C; time point 3 -0.3 +0.0 N.D. -0.4 +0.0
carbon source Ying_sugar7 rep A; time point 3 -0.3 -0.2 N.D. -0.2 +0.1
carbon source Ying_sugar7 rep C; time point 3 -0.2 -0.2 N.D. -0.3 +0.2
carbon source Ying_Nucleobase14 rep A; time point 2 -0.3 +0.1 N.D. +0.1 -0.4
carbon source Ying_all64 rep C; time point 2 -0.1 -0.2 N.D. +0.1 -0.2
carbon source Ying_all64 rep B; time point 3 -0.5 -0.1 N.D. -0.0 +0.3
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.2 +0.1 N.D. +0.1 -0.2
carbon source Ying_Others16 rep C; time point 2 +0.3 -0.3 N.D. -0.1 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.1 +0.1 N.D. +0.1 -0.3
carbon source Ying_sugar7 rep C; time point 2 +0.1 -0.2 N.D. +0.2 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.3 -0.2 N.D. +0.1 -0.1
carbon source Ying_AminoAcid20 rep A; time point 1 +0.1 +0.3 N.D. -0.0 -0.2
carbon source Ying_sugar7 rep A; time point 1 +0.2 +0.0 N.D. +0.2 -0.2
carbon source Ying_all64 rep A; time point 2 +0.2 +0.1 N.D. +0.1 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 1 +0.1 +0.6 N.D. +0.0 -0.4
carbon source Ying_AminoAcid20 rep B; time point 1 +0.1 +0.2 N.D. +0.1 -0.1
carbon source Ying_all64 rep B; time point 1 +0.2 +0.1 N.D. +0.4 -0.2
carbon source Ying_all64 rep B; time point 2 +0.0 +0.4 N.D. +0.2 -0.1
carbon source Ying_all64 rep C; time point 1 +0.4 +0.1 N.D. +0.1 -0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.3 +0.4 N.D. +0.7 -0.2
carbon source Ying_sugar7 rep C; time point 1 +0.2 +0.2 N.D. +0.0 +0.2
carbon source Ying_Others16 rep B; time point 2 +0.3 +0.1 N.D. +0.2 +0.0
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.1 +0.5 N.D. +0.3 +0.2
carbon source Ying_all64 rep A; time point 1 -0.0 +0.3 N.D. +0.3 +0.2
carbon source Ying_Nucleobase14 rep C; time point 1 +0.4 +0.3 N.D. +0.2 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.0 +0.1 N.D. +0.7 +0.5
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