Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_09825	PS417_09830	PS417_09835	PS417_09840	PS417_09845
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	-0.6	-0.3	-0.1	-1.3
solid stress	Fraxetin 3 mM; solid stress	-0.4	-1.0	-0.1	-0.0	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.4	-0.3	-0.0	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	-0.8	-0.4	-0.3	-0.1
agar plate interaction control	Taped volatile agar plate with no fungus	-0.3	-0.6	-0.4	-0.1	-0.2
liquid stress	Fraxetin 3 mM; liquid stress	+0.1	-1.9	+0.2	-0.1	+0.0
soil	soil sample 8; outgrowth in LB	-0.4	-0.6	-0.2	-0.2	-0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3	-0.8	-0.2	+0.3	-0.3
liquid stress	Fraxetin 3 mM; liquid stress	-0.1	-0.9	-0.5	-0.0	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-0.3	-0.3	+0.1	-1.1
motility	outer cut, LB soft agar motility assay	+0.4	-0.5	-0.9	+0.1	-0.1
seeds	Growth on radish seeds for 72 hours	+0.2	-0.8	+0.3	-0.1	-0.4
phage	JP1 MOI 10	-0.5	+0.4	+0.1	-0.1	-0.6
motility	inner cut, LB soft agar motility assay	+0.4	-0.4	-0.5	+0.1	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-0.9	+0.2	+0.2	+0.4
liquid stress	Fraxetin 3 mM; liquid stress	+0.4	-1.0	+0.2	+0.1	-0.0
liquid stress	Fraxetin 3 mM; liquid stress	+0.4	-1.3	+0.2	+0.2	+0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.4	-0.5	+0.3	+0.2	+0.2
stress	methylglyoxal 0.032 vol%	+0.6	-0.7	-0.1	-0.1	+0.2
carbon source	2-Deoxy-D-Ribose 10 mM (C)	+0.2	-1.0	+0.4	-0.1	+0.3
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.2	-1.0	+0.4	+0.1	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4	-0.5	+0.5	+0.2	+0.2
soil	soil sample 5; outgrowth in LB	+0.3	+0.4	-0.8	-0.2	+0.2
phage	JP1 MOI 10	-0.5	+0.4	-0.2	+0.1	+0.6
phage	Wcs_1	+0.2	-0.2	-0.4	-0.1	+0.9
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2	-0.1	-0.3	-0.0	+1.1
phage	Wcs_0.1	-0.2	+0.6	-0.2	+0.0	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.0	+1.9	-0.2	+0.3	-0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3	+0.4	+0.7	+0.0	+0.2
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.0	+0.1	+0.5	-0.1	+0.2