Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1922 and GFF1923 are separated by 83 nucleotidesGFF1923 and GFF1924 are separated by 31 nucleotidesGFF1924 and GFF1925 are separated by 60 nucleotidesGFF1925 and GFF1926 overlap by 4 nucleotides GFF1922 - Acyl-CoA dehydrogenase, at 602,060 to 603,304 GFF1922 GFF1923 - ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 603,388 to 604,416 GFF1923 GFF1924 - Aliphatic sulfonate monooxygenase family, FMNH2- or F420-dependent, at 604,448 to 605,569 GFF1924 GFF1925 - Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases, at 605,630 to 606,454 GFF1925 GFF1926 - ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 606,451 to 607,458 GFF1926
Group Condition GFF1922 GFF1923 GFF1924 GFF1925 GFF1926
complex community Community=arabino-guar; Passage=4 -0.6 +0.0 -0.7 -0.4 -0.8
complex community Community=Locust bean gum; Passage=4 +0.9 -0.0 -0.7 -1.2 -0.7
complex community Community=guar; Passage=4 -0.1 -0.4 -0.9 +0.3 -0.3
complex community Community=Locust bean gum; Passage=4 +0.2 -0.2 -0.4 +0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.1 +0.1 -0.7 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.0 -0.1 -0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.2 -0.1 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.1 +0.4 +0.0 -0.2
complex community Community=Locust bean gum; Passage=4 +0.1 +0.1 -0.2 -0.6 +0.5
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.0 -0.2 +0.0 +0.5
complex community Community=arabino-guar; Passage=4 -0.2 -0.1 -0.1 +0.6 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.0 +0.2 +0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 +0.1 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.1 -0.1 +0.2 +0.3
complex community Community=Kojac gum; Passage=4 +0.1 +0.1 -0.1 -0.4 +0.6
phage phage_bap4 +0.2 +0.1 +0.1 +0.1 -0.2
complex community Community=Kojac gum; Passage=1 +0.1 +0.1 -0.3 +0.0 +0.4
complex community Community=arabino-guar; Passage=4 +0.6 +0.3 -0.1 -0.2 -0.2
no phage control no phage control +0.1 +0.1 -0.1 +0.2 +0.3
complex community Community=arabino-guar; Passage=4 +0.0 -0.5 -0.1 +0.9 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.1 -0.2 +0.2 +0.4
phage phage_bap4 +0.1 +0.1 +0.0 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.1 +0.1 +0.3 +0.1
complex community Community=guar; Passage=4 -0.3 -0.1 +0.1 +0.2 +0.9
phage phage_bap4 +0.1 +0.1 +0.2 +0.5 -0.0
complex community Community=guar; Passage=4 -0.1 +0.4 +0.1 +0.1 +0.5
phage phage_bap4 +0.2 +0.2 +0.1 +0.3 +0.2
complex community Community=Locust bean gum; Passage=4 +0.1 -0.4 +0.0 +0.4 +0.9
phage phage_bap4 +0.4 +0.2 +0.1 +0.5 +0.3
complex community Community=guar; Passage=4 +1.0 +0.1 -0.1 +0.9 +0.1
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