Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1915 and GFF1916 are separated by 111 nucleotidesGFF1916 and GFF1917 are separated by 131 nucleotidesGFF1917 and GFF1918 are separated by 59 nucleotidesGFF1918 and GFF1919 are separated by 114 nucleotides GFF1915 - Deoxycytidine triphosphate deaminase (EC 3.5.4.13), at 595,240 to 595,806 GFF1915 GFF1916 - YpfJ protein, zinc metalloprotease superfamily, at 595,918 to 596,805 GFF1916 GFF1917 - ATP-dependent RNA helicase Bcep18194_A5658, at 596,937 to 598,406 GFF1917 GFF1918 - hypothetical protein, at 598,466 to 598,690 GFF1918 GFF1919 - Rhodanese-related sulfurtransferase, 4 domains, at 598,805 to 600,475 GFF1919
Group Condition GFF1915 GFF1916 GFF1917 GFF1918 GFF1919
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -2.2 -0.2 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 -1.4 -0.4 -0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.0 -2.4 +0.5 -0.2
complex community Community=guar; Passage=4 N.D. -0.3 -1.0 +0.0 -0.5
complex community Community=Locust bean gum; Passage=4 N.D. -0.0 -1.3 -0.1 -0.0
complex community Community=guar; Passage=4 N.D. -0.1 -0.5 -0.6 -0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -1.0 -0.2 +0.0
complex community Community=guar; Passage=4 N.D. -0.1 -1.3 +0.1 -0.0
complex community Community=guar; Passage=4 N.D. +0.3 -1.3 +0.3 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 -0.5 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.0 -0.5 -0.0 -0.3
complex community Community=Kojac gum; Passage=4 N.D. -0.1 -1.0 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.1 -0.5 -0.1 -0.0
complex community Community=arabino-guar; Passage=4 N.D. +0.2 -1.0 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.2 +0.0 -0.2 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. +0.4 -1.5 +0.7 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 -0.4 -0.1 -0.0
phage phage_bap4 N.D. -0.1 -0.7 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.0 -0.2 -0.2 -0.2
phage phage_bap4 N.D. +0.1 -0.4 -0.0 -0.2
phage phage_bap4 N.D. +0.1 -0.7 +0.0 +0.1
no phage control no phage control N.D. -0.0 -0.6 +0.0 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 -0.3 -0.1 -0.2
no phage control no phage control N.D. -0.0 -0.5 +0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 -0.4 -0.0 -0.1
phage phage_bap4 N.D. +0.1 -0.4 -0.1 +0.1
no phage control no phage control N.D. +0.1 -0.5 +0.0 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.3 -0.4 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.0 +0.4 -0.1 -0.1
phage phage_bap4 N.D. +0.1 +0.4 +0.2 +0.1
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