Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1912 and GFF1913 are separated by 106 nucleotidesGFF1913 and GFF1914 are separated by 78 nucleotidesGFF1914 and GFF1915 are separated by 86 nucleotidesGFF1915 and GFF1916 are separated by 111 nucleotides GFF1912 - Transcriptional regulator, LysR family, at 592,195 to 593,076 GFF1912 GFF1913 - Short-chain dehydrogenase, at 593,183 to 593,788 GFF1913 GFF1914 - Guanine deaminase (EC 3.5.4.3), at 593,867 to 595,153 GFF1914 GFF1915 - Deoxycytidine triphosphate deaminase (EC 3.5.4.13), at 595,240 to 595,806 GFF1915 GFF1916 - YpfJ protein, zinc metalloprotease superfamily, at 595,918 to 596,805 GFF1916
Group Condition GFF1912 GFF1913 GFF1914 GFF1915 GFF1916
complex community Community=guar; Passage=4 -0.4 -0.9 -0.3 N.D. +0.3
complex community Community=guar; Passage=4 -0.5 -0.0 -0.5 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 -0.1 -0.5 -0.3 N.D. +0.3
complex community Community=Kojac gum; Passage=4 -0.5 -0.0 -0.1 N.D. -0.1
complex community Community=guar; Passage=4 -0.3 +0.1 -0.2 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.2 -0.1 N.D. -0.2
complex community Community=guar; Passage=4 +0.4 -0.2 -0.3 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.3 +0.1 N.D. +0.0
complex community Community=arabino-guar; Passage=4 +0.1 -0.5 +0.1 N.D. -0.1
phage phage_bap4 -0.3 -0.2 +0.0 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.1 -0.1 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.2 +0.0 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 -0.1 -0.2 N.D. +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 +0.3 -0.2 N.D. +0.1
phage phage_bap4 +0.0 -0.3 +0.1 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 -0.1 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 +0.2 +0.2 -0.1 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.2 +0.2 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 +0.2 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 -0.1 +0.1 +0.1 N.D. +0.4
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.1 +0.2 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.4 +0.1 N.D. -0.1
complex community Community=arabino-guar; Passage=4 +0.2 +0.6 -0.3 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 -0.0 +0.2 N.D. +0.1
complex community Community=Kojac gum; Passage=1 +0.1 +0.3 +0.2 N.D. +0.0
phage phage_bap4 +0.1 +0.2 +0.2 N.D. +0.1
phage phage_bap4 +0.1 +0.2 +0.1 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.4 +0.0 N.D. -0.0
complex community Community=Locust bean gum; Passage=1 +0.2 +0.3 +0.1 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 +0.6 +0.5 -0.3 N.D. -0.0
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