Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_09630	PS417_09635	PS417_09640	PS417_09645	PS417_09650
liquid stress	Fraxetin 3 mM; liquid stress	-1.2	-0.4	-0.8	+0.1	-0.3
liquid stress	Scopoletin 2 mM; liquid stress	-0.9	-0.9	-0.7	-0.2	+0.1
liquid stress	Fraxetin 2 mM; liquid stress	-1.1	-0.4	-0.5	-0.1	-0.3
liquid stress	Fraxetin 2 mM; liquid stress	-0.8	-0.7	-0.4	-0.0	-0.3
solid stress	Fraxetin 2 mM; solid stress	-0.9	-0.9	-0.2	-0.1	-0.1
liquid stress	Fraxetin 2 mM; liquid stress	-0.7	-0.5	-0.5	-0.2	-0.2
liquid stress	Fraxetin 3 mM; liquid stress	-0.9	-0.5	-0.6	-0.0	+0.0
stress	6-methoxy-2(3H)-benzoxazolone 2.5 mM	-0.4	-0.5	-0.9	-0.1	+0.0
supernatant control	Vogels_fungal_media 0.1X	-0.9	-0.8	+0.3	-0.1	-0.2
liquid stress	Scopoletin 3 mM; liquid stress	-1.0	-0.4	-0.5	-0.1	+0.3
solid stress	Fraxetin 3 mM; solid stress	-0.6	-0.7	-0.5	+0.1	+0.1
stress	methylglyoxal 0.032 vol%	-1.1	+0.0	+0.2	+0.4	-0.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.2	+0.4	+0.7	+0.4	-0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.9	+0.4	-0.3	+0.1	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7	+0.7	+0.5	+0.1	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.4	+0.1	+1.8	-0.1	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4	+0.4	+0.9	+0.3	-0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7	+0.3	+0.8	+0.2	-0.1
carbon source	Uridine (C)	+0.5	+0.4	+0.6	+0.4	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	+1.0	+0.4	+0.2	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5	+0.5	+0.7	+0.2	+0.2
root	root sample 6; outgrowth in LB	+0.9	+0.5	+0.8	-0.1	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6	+0.6	+0.8	+0.2	-0.0
carbon source	L-Valine (C)	+0.3	+0.9	+0.6	+0.6	-0.0
carbon source	L-Valine (C)	+0.7	+0.4	+0.9	+0.2	+0.2
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.9	+0.6	+1.4	+0.2	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.3	+0.5	+1.1	+0.3	-0.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.4	+0.7	+1.2	+0.1	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.8	+0.9	+1.1	+0.4	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+1.1	+1.0	+0.9	+0.4	+0.3