Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1884 and GFF1885 are separated by 0 nucleotidesGFF1885 and GFF1886 are separated by 124 nucleotidesGFF1886 and GFF1887 are separated by 16 nucleotidesGFF1887 and GFF1888 are separated by 4 nucleotides GFF1884 - Gluconokinase (EC 2.7.1.12), at 558,550 to 559,071 GFF1884 GFF1885 - Gluconate transporter family protein, at 559,072 to 560,454 GFF1885 GFF1886 - Elongation factor G-like protein TM_1651, at 560,579 to 562,639 GFF1886 GFF1887 - Fumarate hydratase class II (EC 4.2.1.2), at 562,656 to 564,038 GFF1887 GFF1888 - BUG/TctC family periplasmic protein, at 564,043 to 565,032 GFF1888
Group Condition GFF1884 GFF1885 GFF1886 GFF1887 GFF1888
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.9 -0.4 +0.1 N.D. +0.1
complex community Community=guar; Passage=4 +0.1 -0.4 -0.1 N.D. -0.6
complex community Community=Locust bean gum; Passage=4 +0.0 -1.1 +0.0 N.D. +0.1
complex community Community=guar; Passage=4 -0.4 -0.7 +0.0 N.D. +0.0
complex community Community=Locust bean gum; Passage=4 +1.0 -2.1 +0.0 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.9 -0.1 -0.2 N.D. +0.4
phage phage_bap4 -0.9 +0.0 +0.0 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.5 -0.2 N.D. +0.1
complex community Community=Kojac gum; Passage=4 +0.3 -1.3 -0.1 N.D. +0.6
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.6 -0.0 N.D. +0.2
complex community Community=guar; Passage=4 -0.3 +0.3 -0.6 N.D. +0.2
phage phage_bap4 -0.5 +0.1 +0.0 N.D. +0.2
complex community Community=Locust bean gum; Passage=1 -0.1 -0.3 +0.2 N.D. +0.1
complex community Community=guar; Passage=4 -0.4 +0.5 +0.4 N.D. -0.5
complex community Community=arabino-guar; Passage=4 -0.2 +0.2 +0.5 N.D. -0.4
complex community Community=Locust bean gum; Passage=4 -0.3 +0.7 -0.0 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 -0.1 +0.1 N.D. -0.2
no phage control no phage control -0.3 +0.3 +0.0 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 +0.1 -0.3 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.5 -0.3 +0.2 N.D. -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.7 -0.4 -0.0 N.D. +0.1
phage phage_bap4 -0.3 +0.4 +0.1 N.D. +0.3
complex community Community=arabino-guar; Passage=4 +0.2 +0.7 -0.3 N.D. -0.0
complex community Community=Locust bean gum; Passage=4 +1.1 -0.2 -0.5 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus +0.4 -0.3 +0.3 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.6 +0.4 -0.1 N.D. -0.2
phage phage_bap4 +0.1 +0.3 -0.0 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.6 +0.2 +0.1 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.8 +0.3 -0.0 N.D. -0.0
complex community Community=arabino-guar; Passage=4 +0.5 +0.2 -0.2 N.D. +0.7
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