Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1876 and GFF1877 are separated by 9 nucleotidesGFF1877 and GFF1878 are separated by 33 nucleotidesGFF1878 and GFF1879 are separated by 31 nucleotidesGFF1879 and GFF1880 are separated by 279 nucleotides GFF1876 - Dihydrodipicolinate synthase family, at 549,594 to 550,487 GFF1876 GFF1877 - ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines), at 550,497 to 551,279 GFF1877 GFF1878 - Bll6165 protein, at 551,313 to 551,723 GFF1878 GFF1879 - dicarboxylic acid transporter PcaT, at 551,755 to 553,101 GFF1879 GFF1880 - Previously called glutamate synthase [NADPH] small chain, at 553,381 to 555,180 GFF1880
Group Condition GFF1876 GFF1877 GFF1878 GFF1879 GFF1880
complex community Community=arabino-guar; Passage=4 +0.4 N.D. -0.7 +0.0 -0.5
complex community Community=Kojac gum; Passage=4 -0.0 N.D. -0.2 -0.2 -0.3
complex community Community=Locust bean gum; Passage=4 +0.1 N.D. -1.3 +0.0 +0.4
complex community Community=Locust bean gum; Passage=4 +0.0 N.D. -0.9 -0.3 +0.4
complex community Community=arabino-guar; Passage=4 -0.2 N.D. -0.4 +0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.1 N.D. -0.5 +0.2 -0.3
no phage control no phage control -0.2 N.D. -0.3 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 N.D. -0.6 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 N.D. -0.3 -0.1 +0.2
phage phage_bap4 -0.0 N.D. -0.5 +0.0 +0.2
complex community Community=guar; Passage=4 -0.6 N.D. +0.3 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. +0.1 -0.0 -0.4
complex community Community=Kojac gum; Passage=1 +0.0 N.D. -0.3 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 N.D. -0.2 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. -0.2 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 N.D. -0.3 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 N.D. -0.2 -0.2 +0.2
phage phage_bap4 +0.1 N.D. -0.3 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 N.D. -0.3 +0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 N.D. -0.1 -0.1 +0.4
phage phage_bap4 -0.1 N.D. -0.2 +0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.1 N.D. -0.3 -0.1 +0.3
no phage control no phage control +0.0 N.D. -0.3 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. +0.1 -0.2 +0.3
complex community Community=Locust bean gum; Passage=4 +0.2 N.D. -0.5 +0.0 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 N.D. +0.5 -0.1 +0.2
complex community Community=guar; Passage=4 -0.1 N.D. -0.1 +0.2 +0.9
complex community Community=Locust bean gum; Passage=4 -0.0 N.D. +0.9 +0.2 -0.2
complex community Community=guar; Passage=4 -0.1 N.D. +0.4 +0.1 +0.5
complex community Community=guar; Passage=4 -0.2 N.D. +0.6 +0.0 +0.7
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