Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1869 and GFF1870 overlap by 4 nucleotidesGFF1870 and GFF1871 are separated by 13 nucleotidesGFF1871 and GFF1872 are separated by 36 nucleotidesGFF1872 and GFF1873 are separated by 4 nucleotides GFF1869 - no description, at 543,775 to 544,248 GFF1869 GFF1870 - Coenzyme A transferase, at 544,245 to 545,846 GFF1870 GFF1871 - Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1), at 545,860 to 547,002 GFF1871 GFF1872 - no description, at 547,039 to 547,431 GFF1872 GFF1873 - KEGG: LacI family transcriptional regulator, at 547,436 to 548,446 GFF1873
Group Condition GFF1869 GFF1870 GFF1871 GFF1872 GFF1873
complex community Community=Locust bean gum; Passage=4 -3.0 +0.5 -0.3 +0.0 -1.7
complex community Community=arabino-guar; Passage=4 -0.9 +0.5 -1.7 +0.0 -1.5
vitamin M9 with calcium pantothenate 10 mg/mL -1.0 +0.1 -0.9 -0.0 -0.6
complex community Community=guar; Passage=4 -0.5 -0.2 -0.0 -0.4 -1.3
complex community Community=guar; Passage=4 +0.0 +0.2 -1.2 -0.2 -1.1
vitamin M9 with Supernatant from Cyptococcus -1.1 +0.1 -0.4 -0.0 -0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 -0.3 -0.6 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -1.1 -0.1 -0.5 -0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.1 -0.5 -0.1 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.9 -0.3 -0.3 +0.0 -0.1
complex community Community=Locust bean gum; Passage=4 -1.0 +0.7 +0.1 -0.8 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.8 -0.4 -0.0 +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.1 -0.4 -0.3 -0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.4 -0.6 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.9 -0.0 +0.1 +0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.4 -0.1 +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.1 -0.3 -0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.3 -0.4 -0.1 -0.4
complex community Community=Kojac gum; Passage=1 -0.3 -0.4 -0.3 -0.2 +0.2
complex community Community=guar; Passage=4 -0.1 -0.6 -0.9 +0.2 +0.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.4 -0.6 -0.2 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.4 -0.6 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.4 +0.2 +0.4 -0.4 -1.2
phage phage_bap4 -0.3 +0.2 -0.3 -0.2 +0.2
complex community Community=arabino-guar; Passage=4 +0.4 -0.1 -0.2 +0.3 -0.8
phage phage_bap4 -0.4 -0.5 +0.2 +0.0 +0.6
no phage control no phage control +0.2 +0.2 -0.4 +0.0 +0.5
complex community Community=Locust bean gum; Passage=4 +0.7 +0.6 -0.1 -0.5 -0.0
phage phage_bap4 -0.2 +0.3 +0.4 +0.0 +0.3
phage phage_bap4 +0.8 +0.1 +0.1 +0.1 +0.3
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