Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF1868 and GFF1869 are separated by 3 nucleotidesGFF1869 and GFF1870 overlap by 10 nucleotidesGFF1870 and GFF1871 are separated by 2 nucleotidesGFF1871 and GFF1872 are separated by 40 nucleotides GFF1868 - O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26), at 732,309 to 733,838 GFF1868 GFF1869 - AmpG permease, at 733,842 to 735,257 GFF1869 GFF1870 - Zn-dependent protease with chaperone function, at 735,248 to 736,153 GFF1870 GFF1871 - Hypothetical metal-binding enzyme, YcbL homolog, at 736,156 to 736,794 GFF1871 GFF1872 - Phenylalanyl-tRNA synthetase beta subunit, at 736,835 to 737,320 GFF1872
Group Condition GFF1868 GFF1869 GFF1870 GFF1871 GFF1872
carbon source Ying_all64 rep B; time point 3 +0.3 -0.6 -0.3 -0.3 +0.0
carbon source Ying_Others16 rep A; time point 3 -0.2 -0.6 -0.1 -0.0 +0.2
carbon source Ying_Nucleobase14 rep A; time point 2 +0.2 -0.5 +0.1 -0.3 -0.1
carbon source Ying_Others16 rep B; time point 3 +0.1 -0.5 -0.1 -0.0 +0.1
carbon source Ying_sugar7 rep A; time point 3 +0.3 -0.4 -0.2 -0.0 +0.0
carbon source Ying_all64 rep C; time point 3 +0.1 -0.1 -0.4 +0.1 -0.0
carbon source Ying_Others16 rep C; time point 3 +0.3 -0.5 -0.3 +0.1 +0.1
carbon source Ying_all64 rep A; time point 3 +0.3 -0.3 +0.1 -0.4 +0.2
carbon source Ying_Nucleobase14 rep C; time point 2 +0.0 -0.7 -0.0 +0.7 -0.1
carbon source Ying_sugar7 rep B; time point 3 +0.0 -0.5 +0.0 +0.4 -0.0
carbon source Ying_Others16 rep A; time point 2 +0.1 -0.6 +0.3 +0.1 +0.2
carbon source Ying_sugar7 rep B; time point 2 +0.4 -0.4 -0.2 +0.2 +0.0
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.3 -0.1 -0.2 -0.2 +0.3
carbon source Ying_Nucleobase14 rep A; time point 1 +0.2 +0.0 +0.1 +0.2 -0.4
carbon source Ying_all64 rep C; time point 2 +0.2 +0.2 -0.1 -0.2 -0.0
carbon source Ying_Others16 rep B; time point 2 +0.2 -0.2 -0.2 +0.3 +0.1
carbon source Ying_sugar7 rep C; time point 1 +0.3 -0.4 +0.1 +0.2 -0.0
carbon source Ying_Others16 rep C; time point 1 +0.1 +0.2 -0.2 +0.2 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.1 -0.3 +0.1 +0.2 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.2 -0.1 -0.3 +0.1 +0.2
carbon source Ying_sugar7 rep A; time point 1 +0.2 +0.0 -0.3 +0.5 +0.0
carbon source Ying_sugar7 rep A; time point 2 +0.1 -0.2 +0.2 +0.4 -0.1
carbon source Ying_Nucleobase14 rep B; time point 2 +0.3 -0.2 +0.1 +0.4 -0.0
carbon source Ying_AminoAcid20 rep A; time point 2 +0.1 +0.2 +0.1 +0.4 -0.3
carbon source Ying_all64 rep B; time point 1 +0.2 +0.0 +0.2 +0.3 -0.2
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.2 -0.0 -0.1 +0.4 +0.1
carbon source Ying_Others16 rep B; time point 1 +0.1 +0.2 -0.0 +0.5 -0.1
carbon source Ying_sugar7 rep B; time point 1 +0.2 -0.2 +0.0 +0.4 +0.2
carbon source Ying_sugar7 rep C; time point 3 +0.3 -0.3 +0.3 +0.1 +0.3
carbon source Ying_sugar7 rep C; time point 2 +0.1 -0.3 +0.3 +0.5 +0.2
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