Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF1864 and GFF1865 overlap by 6 nucleotidesGFF1865 and GFF1866 are separated by 154 nucleotidesGFF1866 and GFF1867 overlap by 4 nucleotidesGFF1867 and GFF1868 overlap by 1 nucleotides GFF1864 - Polymyxin resistance protein PmrM, at 57,339 to 57,716 GFF1864 GFF1865 - Polymyxin resistance protein PmrD, at 57,711 to 57,911 GFF1865 GFF1866 - O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26), at 58,066 to 59,433 GFF1866 GFF1867 - O-succinylbenzoate synthase (EC 4.2.1.113), at 59,430 to 60,392 GFF1867 GFF1868 - Naphthoate synthase (EC 4.1.3.36), at 60,392 to 61,249 GFF1868
Group Condition GFF1864 GFF1865 GFF1866 GFF1867 GFF1868
micoeukaryotes Dictyostellum sp.mixed culture-2 -2.8 -0.4 -0.0 -0.4 -0.2
micoeukaryotes C.elegans, mixed culture-1 -2.1 +0.1 -0.1 -0.4 +0.2
micoeukaryotes Acanthamoeba sp., muxed culture-1 -2.1 +0.0 +0.1 -0.0 -0.1
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.1 -0.1 +0.1 +0.0 +0.1
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI -1.5 +0.6 -0.2 -0.1 -0.6
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI -1.0 +0.3 -0.4 -0.2 -0.5
micoeukaryotes Dictyostellum sp.mixed culture-1 -1.5 +0.3 -0.0 +0.2 -0.3
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI +0.1 -0.1 -0.3 -0.1 -0.9
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI -0.7 +0.3 -0.3 +0.0 -0.6
phage Ffm_phage 10 MOI; agar plate assay -1.3 +0.5 +0.0 -0.4 -0.1
micoeukaryotes C.elegans, mixed culture-2 -1.3 +0.1 -0.1 +0.1 +0.1
phage LB_plus_SM_buffer with P22_phage 15 MOI -1.2 -0.2 +0.2 +0.1 +0.1
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.7 -0.5 -0.1 +0.0 +0.6
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI -0.4 +0.9 -0.3 -0.2 -0.6
phage LB_plus_SM_buffer with Ffm_phage 18.75 MOI +0.1 +0.4 -0.1 +0.0 -0.9
phage phi19h1_phage 15 MOI -0.9 -0.2 +0.2 +0.2 +0.2
phage 6F2_phage 15 MOI -0.1 -0.6 +0.2 -0.3 +0.4
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI -0.9 -0.2 +0.3 +0.2 +0.2
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI -0.9 +0.6 +0.4 +0.1 -0.2
phage LB_plus_SM_buffer with Br60_phage 0.0000005 MOI +0.3 +0.6 -0.3 -0.2 -0.3
phage LB_plus_SM_buffer with EIP16_phage 0.875 MOI +1.1 -0.4 -0.1 +0.1 -0.4
phage LB_plus_SM_buffer with 6D2_phage 0.75 MOI -0.2 -0.3 +0.5 +0.3 +0.3
nophagecontrol No phage control +0.2 -0.2 +0.4 +0.4 +0.4
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI +0.6 +0.8 -0.6 -0.1 +0.5
phage LB_plus_SM_buffer with 6H2_phage 0.5 MOI +0.6 -0.1 +0.3 +0.1 +0.4
phage phi19h1_phage 15 MOI +0.5 -0.5 +0.2 +0.7 +0.7
phage 6H2_phage 10 MOI; agar plate assay +0.8 -0.5 +0.2 +1.0 +0.1
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI -2.0 +0.1 +0.9 +0.3 +2.3
lb_plus_sm_buffer LB_plus_SM_buffer +0.0 +0.1 +0.6 +0.6 +0.5
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI +0.7 +0.1 +0.3 +0.4 +0.7
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