Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1856 and GFF1857 are separated by 92 nucleotidesGFF1857 and GFF1858 overlap by 4 nucleotidesGFF1858 and GFF1859 overlap by 4 nucleotidesGFF1859 and GFF1860 are separated by 12 nucleotides GFF1856 - FIG00636408: hypothetical protein, at 531,353 to 531,745 GFF1856 GFF1857 - FIG00553873: hypothetical protein, at 531,838 to 533,118 GFF1857 GFF1858 - ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines), at 533,115 to 533,879 GFF1858 GFF1859 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 533,876 to 534,547 GFF1859 GFF1860 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 534,560 to 535,327 GFF1860
Group Condition GFF1856 GFF1857 GFF1858 GFF1859 GFF1860
vitamin M9 with calcium pantothenate 10 mg/mL -1.0 +0.1 -2.0 -0.2 +0.2
complex community Community=arabino-guar; Passage=4 -1.7 -0.2 -0.6 +0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.4 -0.2 -0.9 -0.3 -0.4
complex community Community=Locust bean gum; Passage=4 +0.3 +0.2 -2.0 -0.5 +0.1
complex community Community=Locust bean gum; Passage=4 -0.2 -0.5 -1.2 +0.5 -0.2
phage phage_bap4 -0.3 -0.1 -1.2 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.8 -0.1 -0.7 -0.1 -0.0
no phage control no phage control -0.5 +0.1 -1.2 +0.1 +0.0
phage phage_bap4 -0.5 -0.1 -0.8 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.1 -0.8 -0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 -0.0 -0.7 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.6 +0.5 -1.1 -0.0 -0.2
no phage control no phage control -0.3 -0.1 -1.0 +0.1 +0.0
complex community Community=Kojac gum; Passage=1 -0.3 -0.2 -0.8 +0.1 -0.0
phage phage_bap4 +0.2 -0.1 -1.4 +0.1 +0.0
complex community Community=arabino-guar; Passage=4 +0.6 -0.8 -0.2 -0.0 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 +0.4 -0.7 -0.2 +0.0
complex community Community=arabino-guar; Passage=4 -1.0 -0.6 +0.8 +0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.1 -0.0 +0.7 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -1.1 +0.3 +0.4 -0.1 -0.1
phage phage_bap4 -0.5 +0.3 -0.5 +0.2 +0.1
complex community Community=guar; Passage=4 -0.9 -0.2 +0.7 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.9 +0.2 +0.8 -0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.3 +0.3 -0.3 -0.2
complex community Community=guar; Passage=4 -0.6 -0.5 +0.7 +0.2 +0.1
complex community Community=guar; Passage=4 +0.8 -0.6 -0.3 +0.3 -0.1
complex community Community=Kojac gum; Passage=4 +0.6 +0.5 -0.7 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.3 -0.0 +1.2 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.6 +0.3 +0.5 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.4 +0.0 +0.9 -0.0 +0.1
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