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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1855 and GFF1856 are separated by 146 nucleotides
GFF1856 and GFF1857 are separated by 44 nucleotides
GFF1857 and GFF1858 are separated by 280 nucleotides
GFF1858 and GFF1859 are separated by 2 nucleotides
GFF1855 - Uncharacterized protein YfaZ precursor, at 48,169 to 48,843
GFF1855
GFF1856 - Pyrimidine deoxynucleoside triphosphate (dYTP) pyrophosphohydrolase YfoO, at 48,990 to 49,415
GFF1856
GFF1857 - Polymyxin resistance protein PmrG; Ais protein, at 49,460 to 50,065
GFF1857
GFF1858 - UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-), at 50,346 to 51,503
GFF1858
GFF1859 - Polymyxin resistance protein ArnC, glycosyl transferase (EC 2.4.-.-), at 51,506 to 52,489
GFF1859
Group
Condition
GFF1855
GFF1856
GFF1857
GFF1858
GFF1859
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-0.5
-1.0
-0.2
-0.1
+0.0
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
-0.2
-0.2
-0.8
-0.3
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
-0.0
-0.8
-0.2
-0.4
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-0.3
-0.6
-0.2
-0.1
-0.1
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.1
-0.6
-0.4
+0.1
-0.1
phage
phi19h1_phage 15 MOI
-0.4
-0.2
+0.2
-0.2
-0.1
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
+0.1
+0.1
-0.8
-0.1
-0.1
phage
phi19h1_phage 15 MOI
-0.2
-0.8
+0.4
+0.0
-0.1
phage
LB_plus_SM_buffer with P22_phage 15 MOI
-0.1
+0.5
-1.5
+0.6
+0.1
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
-0.2
-0.6
+0.5
-0.1
+0.2
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.1
-0.0
-0.7
+0.2
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
-0.2
-0.2
-0.3
+0.4
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-0.1
-1.3
+0.7
+0.3
+0.3
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
-0.5
-0.2
+0.5
+0.4
-0.0
phage
LB_plus_SM_buffer with Ffm_phage 0.01875 MOI
+0.2
+0.4
-0.5
+0.1
+0.1
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
+0.0
-0.5
+0.6
+0.1
+0.0
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
+0.1
+0.4
-0.5
+0.1
+0.1
phage
6H2_phage 10 MOI; agar plate assay
-0.1
-0.3
+1.1
-0.3
+0.0
phage
LB_plus_SM_buffer with Br60_phage 0.0000005 MOI
+0.3
+0.3
-0.3
+0.1
+0.2
phage
phi19h1_phage 15 MOI
+0.0
-0.3
+0.9
-0.0
-0.0
lb_plus_sm_buffer
LB_plus_SM_buffer
+0.2
+0.3
-0.2
+0.2
+0.2
phage
6F2_phage 15 MOI
-0.2
+0.3
+0.5
+0.3
-0.1
phage
LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI
-0.2
+0.1
+0.9
-0.1
+0.1
nophagecontrol
No phage control
+0.0
-0.1
+1.0
+0.1
+0.0
phage
6F2_phage 15 MOI
+0.3
-0.1
+0.4
+0.5
+0.1
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
-0.6
+0.6
+0.2
+1.2
-0.1
phage
LB_plus_SM_buffer with Ffm_phage 0.000001875 MOI
+0.4
+0.3
+0.2
+0.2
+0.1
phage
Ffm_phage 10 MOI; agar plate assay
-0.3
+0.4
+0.5
+0.4
+0.3
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
-0.3
+0.2
+1.6
+0.4
+0.1
phage
6F2_phage 15 MOI
+0.5
+0.9
+1.1
+0.3
+0.1
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