Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_09425	PS417_09430	PS417_09435	PS417_09440	PS417_09445
seeds	Growth on radish seeds for 72 hours	+0.0	-0.5	-0.7	-1.4	-1.2
root	root sample 6; outgrowth in LB	+0.1	-0.4	-0.3	-2.1	-0.4
phage	JP1 MOI 0.1	+0.1	-0.3	-0.8	-2.2	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	-0.6	-0.9	-0.3	-0.5
phage	P. simiae ORA MOI 0.1	-0.3	+0.1	-0.5	-0.7	-0.7
soil	soil sample 6; outgrowth in LB	-0.0	-0.4	-0.4	-0.9	-0.3
phage	P. simiae ORA MOI 0.1	-0.2	-0.0	-0.2	-0.3	-1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2	-0.5	+0.1	-1.2	-0.1
soil	soil sample 8; outgrowth in LB	-0.1	-0.2	-0.5	-1.5	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.1	+0.2	-1.0	-1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.1	+0.2	-0.1	-1.4	-0.3
phage	Wcs_0.1	-0.2	-0.7	+0.3	-0.2	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.1	+0.2	-0.3	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	+0.3	-0.2	-0.8	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.0	+0.4	-0.5	-0.7	-0.4
soil	soil sample 5; outgrowth in LB	+0.3	+0.2	+0.3	-1.0	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	-0.0	+0.6	+0.0	-1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	+0.0	-0.7	+0.5	-0.8
stress	methylglyoxal 0.032 vol%	-0.1	-0.3	+0.4	+0.2	-1.1
seeds	Growth on radish seeds for 72 hours	+0.3	-0.6	+0.2	-0.1	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.3	-0.5	+0.1	-0.5	+0.5
phage	P. simiae Grant Run MOI 0.1	+0.1	-0.0	+0.4	-1.1	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.1	+0.6	+0.2	-1.2	-0.1
phage	P. simiae OR Antrim MOI 0.1	+0.3	-0.4	-0.4	+0.6	-0.6
seeds	Growth on radish seeds for 72 hours	-0.5	-0.5	+0.9	+0.2	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.1	-0.3	+1.3	-0.2	-0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.1	-0.2	+0.8	+0.8	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.2	-0.1	+0.7	-0.5	+1.1
nitrogen source	Urea (N)	+0.1	-0.2	+0.2	+1.7	-0.2
phage	P. simiae OR Antrim MOI 10	+0.2	-0.2	+0.2	+1.0	+0.7