Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF1850 and GFF1851 are separated by 25 nucleotidesGFF1851 and GFF1852 are separated by 55 nucleotidesGFF1852 and GFF1853 are separated by 13 nucleotidesGFF1853 and GFF1854 are separated by 249 nucleotides GFF1850 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-), at 42,433 to 43,236 GFF1850 GFF1851 - L-rhamnonate transporter (predicted by genome context), at 43,262 to 44,551 GFF1851 GFF1852 - L-rhamnonate dehydratase (EC 4.2.1.90), at 44,607 to 45,812 GFF1852 GFF1853 - Transcriptional regulator, IclR family, at 45,826 to 46,608 GFF1853 GFF1854 - Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type E, at 46,858 to 48,054 GFF1854
Group Condition GFF1850 GFF1851 GFF1852 GFF1853 GFF1854
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.3 -0.2 -0.2 -0.2 -0.1
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI -0.3 -0.2 -0.1 +0.0 -0.2
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.3 +0.0 -0.1 -0.4 -0.0
phage LB_plus_SM_buffer with EIP16_phage 0.0875 MOI +0.3 -0.1 -0.2 -0.4 -0.2
phage Ffm_phage 10 MOI; agar plate assay +0.1 -0.5 -0.2 -0.1 +0.0
phage LB_plus_SM_buffer with EIP16_phage 0.875 MOI +0.2 -0.2 -0.3 -0.2 -0.0
phage LB_plus_SM_buffer with 6C2_phage 0.25 MOI -0.1 +0.1 -0.2 -0.3 +0.1
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI +0.3 -0.0 -0.3 -0.2 -0.2
phage 6H2_phage 10 MOI; agar plate assay -0.3 +0.2 -0.3 -0.2 +0.5
phage 6F2_phage 15 MOI -0.1 -0.2 +0.1 +0.4 -0.1
phage LB_plus_SM_buffer with Ffm_phage 18.75 MOI +0.3 -0.1 -0.3 +0.1 -0.0
nophagecontrol No phage control -0.2 +0.1 -0.1 +0.2 +0.3
nophagecontrol No phage control -0.1 +0.2 -0.2 -0.0 +0.4
phage phi19h1_phage 15 MOI -0.2 +0.3 -0.1 -0.2 +0.4
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI -0.1 +0.9 -0.1 -0.2 -0.1
lb_plus_sm_buffer LB_plus_SM_buffer +0.2 +0.1 +0.1 +0.3 -0.1
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI +0.1 +0.2 -0.2 +0.3 +0.1
phage LB_plus_SM_buffer with 6F2_phage 1.875 MOI +0.0 +0.0 -0.2 +0.8 +0.1
phage LB_plus_SM_buffer with Ffm_phage 0.001875 MOI +0.2 +0.1 -0.1 +0.4 +0.1
phage LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI +0.2 -0.1 +0.1 +0.4 +0.2
phage LB_plus_SM_buffer with P22_phage 15 MOI +0.1 +0.2 +0.4 +0.0 +0.3
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.2 +0.0 +0.2 +0.1 +0.4
phage LB_plus_SM_buffer with 6C2_phage 15 MOI +0.1 +0.1 +0.2 +0.3 +0.2
phage LB_plus_SM_buffer with 8C2_phage 15 MOI +0.0 +0.2 +0.4 +0.0 +0.3
phage 6F2_phage 15 MOI +0.2 -0.1 +0.3 +0.5 +0.3
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.0 +0.2 +0.2 +0.3 +0.5
phage LB_plus_SM_buffer with 6D2_phage 15 MOI +0.2 +0.2 +0.3 +0.5 +0.1
phage 6F2_phage 15 MOI +0.1 +0.3 +0.2 +0.4 +0.4
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI +0.2 +0.1 +0.2 +0.5 +0.5
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI +0.8 +0.2 -0.3 +0.7 +0.8
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