Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1849 and GFF1850 are separated by 88 nucleotidesGFF1850 and GFF1851 overlap by 8 nucleotidesGFF1851 and GFF1852 are separated by 23 nucleotidesGFF1852 and GFF1853 are separated by 104 nucleotides GFF1849 - FIG00347667: hypothetical protein, at 523,910 to 524,701 GFF1849 GFF1850 - Tetracenomycin polyketide synthesis O-methyltransferase TcmP, at 524,790 to 525,548 GFF1850 GFF1851 - TOMM biosynthesis cyclodehydratase (protein C) / TOMM biosynthesis docking scaffold (protein D), at 525,541 to 527,778 GFF1851 GFF1852 - FHA domain protein, at 527,802 to 528,740 GFF1852 GFF1853 - no description, at 528,845 to 529,504 GFF1853
Group Condition GFF1849 GFF1850 GFF1851 GFF1852 GFF1853
complex community Community=guar; Passage=4 -0.6 -0.2 -0.1 -0.0 -0.4
complex community Community=Locust bean gum; Passage=4 +0.0 -0.0 +0.1 +0.3 -1.0
complex community Community=Kojac gum; Passage=4 -0.3 +0.1 -0.1 +0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.2 -0.2 +0.0 -0.3
complex community Community=guar; Passage=4 +0.3 -0.3 -0.5 +0.1 -0.0
complex community Community=arabino-guar; Passage=4 +0.1 +0.3 -0.6 -0.1 +0.0
complex community Community=guar; Passage=4 -0.2 -0.0 +0.1 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.1 -0.2 -0.0 -0.2
phage phage_bap4 -0.1 +0.4 -0.1 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.3 -0.4 +0.1 +0.2 +0.3
phage phage_bap4 +0.1 -0.1 -0.1 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.3 +0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.1 -0.2 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 +0.9 -0.2 -0.1 -0.0 -0.5
phage phage_bap4 +0.3 -0.1 -0.1 +0.1 -0.0
complex community Community=guar; Passage=4 +0.4 +0.1 -0.2 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.2 +0.0 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 +0.2 -0.2 -0.0 -0.1
phage phage_bap4 +0.2 +0.4 -0.2 -0.2 -0.1
complex community Community=arabino-guar; Passage=4 +0.4 -0.4 +0.0 +0.0 +0.3
phage phage_bap4 +0.2 +0.4 -0.3 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 -0.1 -0.0 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.1 +0.1 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.2 +0.1 -0.1 +0.2
no phage control no phage control +0.4 +0.1 -0.0 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.0 +0.3 +0.1 -0.0
no phage control no phage control +0.3 +0.1 +0.0 +0.1 +0.0
complex community Community=Locust bean gum; Passage=4 +0.7 -0.4 -0.1 +0.1 +0.2
complex community Community=arabino-guar; Passage=4 +0.1 +0.4 +0.3 +0.1 -0.2
complex community Community=Locust bean gum; Passage=4 +1.0 +0.0 +0.5 +0.5 -0.2
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