Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF1847 and GFF1848 are separated by 359 nucleotidesGFF1848 and GFF1849 are separated by 18 nucleotidesGFF1849 and GFF1850 are separated by 88 nucleotidesGFF1850 and GFF1851 overlap by 8 nucleotides GFF1847 - Nucleoside ABC transporter, substrate-binding protein, at 518,316 to 519,491 GFF1847 GFF1848 - Proteins incorrectly called adenylate cyclase, at 519,851 to 523,891 GFF1848 GFF1849 - FIG00347667: hypothetical protein, at 523,910 to 524,701 GFF1849 GFF1850 - Tetracenomycin polyketide synthesis O-methyltransferase TcmP, at 524,790 to 525,548 GFF1850 GFF1851 - TOMM biosynthesis cyclodehydratase (protein C) / TOMM biosynthesis docking scaffold (protein D), at 525,541 to 527,778 GFF1851
Group Condition GFF1847 GFF1848 GFF1849 GFF1850 GFF1851
complex community Community=guar; Passage=4 +0.3 -0.3 -0.6 -0.2 -0.1
complex community Community=guar; Passage=4 +0.0 -0.0 +0.3 -0.3 -0.5
complex community Community=arabino-guar; Passage=4 +0.2 -0.1 -0.3 -0.4 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.0 +0.2 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 +0.1 +0.1 -0.2 -0.2
complex community Community=arabino-guar; Passage=4 -0.3 +0.1 +0.4 -0.4 +0.0
complex community Community=Kojac gum; Passage=4 +0.1 +0.1 -0.3 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.0 +0.3 -0.1 -0.2
phage phage_bap4 -0.1 -0.1 +0.2 +0.4 -0.3
phage phage_bap4 -0.1 -0.0 -0.1 +0.4 -0.1
phage phage_bap4 +0.0 -0.0 +0.3 -0.1 -0.1
complex community Community=guar; Passage=4 +0.0 +0.2 -0.2 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.1 +0.3 -0.2 +0.0
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 +0.1 +0.3 -0.6
phage phage_bap4 -0.1 -0.2 +0.2 +0.4 -0.2
phage phage_bap4 +0.1 -0.0 +0.2 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 +0.0 +0.3 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.0 +0.2 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.0 +0.2 -0.1 +0.1
no phage control no phage control -0.1 -0.0 +0.3 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 +0.1 +0.2 +0.1
no phage control no phage control -0.0 +0.1 +0.4 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.1 +0.3 +0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.0 +0.2 +0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.1 +0.2 +0.1 -0.1
complex community Community=guar; Passage=4 +0.2 +0.1 +0.4 +0.1 -0.2
complex community Community=Locust bean gum; Passage=4 +0.1 +0.2 +0.7 -0.4 -0.1
complex community Community=Locust bean gum; Passage=4 +0.1 -0.0 +0.9 -0.2 -0.1
complex community Community=arabino-guar; Passage=4 +0.1 -0.0 +0.1 +0.4 +0.3
complex community Community=Locust bean gum; Passage=4 +0.2 -0.1 +1.0 +0.0 +0.5
remove
GFF1847
plot		 remove
GFF1848
plot		 remove
GFF1849		 remove
GFF1850
plot		 remove
GFF1851
plot