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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1845 and GFF1846 overlap by 11 nucleotides
GFF1846 and GFF1847 overlap by 4 nucleotides
GFF1847 and GFF1848 are separated by 425 nucleotides
GFF1848 and GFF1849 are separated by 109 nucleotides
GFF1845 - Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3), at 36,629 to 38,257
GFF1845
GFF1846 - Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3), at 38,247 to 39,506
GFF1846
GFF1847 - Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3), at 39,503 to 40,693
GFF1847
GFF1848 - FIG074102: hypothetical protein, at 41,119 to 42,141
GFF1848
GFF1849 - Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type E, at 42,251 to 42,427
GFF1849
Group
Condition
GFF1845
GFF1846
GFF1847
GFF1848
GFF1849
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
-0.8
-0.3
+0.2
+0.1
-0.3
micoeukaryotes
C.elegans, mixed culture-2
+0.4
+0.2
+0.1
-1.2
-0.4
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.7
+0.0
-0.2
+0.2
-0.2
phage
Br60_phage 15 MOI
+0.2
+0.0
+0.1
-0.8
-0.3
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
+0.5
-0.1
+0.0
-0.9
-0.0
phage
phi19h1_phage 15 MOI
+1.1
+0.2
-0.1
-1.6
-0.0
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
-0.2
-0.1
+0.5
-0.3
-0.3
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
+0.2
+0.1
+0.3
-0.7
-0.1
phage
Ffm_phage 10 MOI; agar plate assay
-1.2
+0.4
+0.2
+0.2
+0.2
micoeukaryotes
Dictyostellum sp.mixed culture-2
+0.6
+0.2
-0.2
-0.5
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
+1.6
-0.2
+0.4
-1.0
-0.6
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.4
+0.2
-0.0
+0.6
-0.1
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.4
+0.2
+0.3
-0.1
-0.5
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
-0.2
-0.1
+0.5
+0.3
-0.3
phage
LB_plus_SM_buffer with phi19h1_phage 15 MOI
-0.5
+0.2
+0.0
+0.8
-0.0
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
+0.3
-0.2
-0.4
+0.6
+0.0
phage
6F2_phage 15 MOI
+0.0
+0.4
+0.3
-0.5
+0.3
phage
LB_plus_SM_buffer with Ffm_phage 0.001875 MOI
+0.6
+0.4
+0.2
-0.5
-0.3
nophagecontrol
No phage control
+0.6
+0.3
+0.2
-0.5
+0.0
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.0
-0.0
+0.3
+0.8
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.3
+0.3
+0.1
+0.8
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.7
+0.4
+0.3
+0.4
+0.1
phage
6F2_phage 15 MOI
+0.3
+0.3
+0.4
+0.3
+0.6
phage
LB_plus_SM_buffer with P22_phage 15 MOI
+0.4
+0.0
+0.3
+1.3
-0.1
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+1.0
+0.4
+0.1
+0.4
+0.3
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+0.8
-0.0
+0.1
+1.0
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.5
+0.1
-0.0
+1.5
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.8
+0.4
+0.2
+0.9
+0.0
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.6
+0.2
-0.1
+1.5
+0.2
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+0.0
+1.2
+0.7
+0.8
+0.2
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