Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1835 and GFF1836 are separated by 14 nucleotidesGFF1836 and GFF1837 are separated by 107 nucleotidesGFF1837 and GFF1838 are separated by 51 nucleotidesGFF1838 and GFF1839 are separated by 22 nucleotides GFF1835 - Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8), at 500,825 to 502,441 GFF1835 GFF1836 - Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8), at 502,456 to 504,585 GFF1836 GFF1837 - Transcriptional regulator, LysR family, at 504,693 to 505,607 GFF1837 GFF1838 - Manganese transport protein MntH, at 505,659 to 506,912 GFF1838 GFF1839 - Integral membrane protein, at 506,935 to 507,714 GFF1839
Group Condition GFF1835 GFF1836 GFF1837 GFF1838 GFF1839
complex community Community=arabino-guar; Passage=4 -1.4 +0.1 -0.3 -0.1 +0.1
complex community Community=Kojac gum; Passage=4 -0.4 +0.0 +0.2 -0.4 -0.6
complex community Community=arabino-guar; Passage=4 +0.3 -0.4 -1.1 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 -0.1 -0.1 -0.6 -0.0 -0.1
complex community Community=guar; Passage=4 -0.5 +0.1 -0.5 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 -0.0 -0.2 +0.1 -0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.8 +0.1 -0.2 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.7 +0.2 +0.2 -0.1 -0.3
phage phage_bap4 -0.1 +0.2 -0.1 -0.5 -0.1
complex community Community=arabino-guar; Passage=4 -0.2 -0.4 -0.4 +0.5 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.6 +0.2 -0.0 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.5 +0.0 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 +0.1 -0.1 +0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 +0.1 -0.2 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.3 -0.3 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 -0.6 +0.9 -0.7 -0.2 +0.3
complex community Community=guar; Passage=4 -1.0 +0.0 +0.2 +0.3 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.0 -0.3 +0.1 +0.3
phage phage_bap4 -0.3 +0.4 -0.1 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 +0.3 +0.0 +0.1 -0.3
no phage control no phage control -0.4 +0.3 +0.3 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 +0.4 +0.4 +0.3 -0.5 -0.3
phage phage_bap4 +0.1 +0.3 +0.2 -0.0 -0.2
complex community Community=guar; Passage=4 +0.1 -0.2 +0.1 +0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.1 -0.1 +0.3 +0.3
phage phage_bap4 +0.2 +0.3 +0.2 -0.1 +0.2
phage phage_bap4 +0.0 +0.5 +0.4 -0.0 +0.0
complex community Community=guar; Passage=4 +0.3 -0.4 +0.4 +0.8 -0.1
phage phage_bap4 +0.3 +0.4 +0.1 +0.1 +0.2
complex community Community=arabino-guar; Passage=4 +0.4 +0.4 -0.5 +0.7 +1.0
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